From Wikipedia, the free encyclopedia
acylphosphatase
Identifiers
EC no. 3.6.1.7
CAS no. 9012-34-4
Databases
IntEnz IntEnz view
BRENDA BRENDA entry
ExPASy NiceZyme view
KEGG KEGG entry
MetaCyc metabolic pathway
PRIAM profile
PDB structures RCSB PDB PDBe PDBsum
Gene Ontology AmiGO / QuickGO
Search
PMC articles
PubMed articles
NCBI proteins
Acylphosphatase
Structure of acylphosphatase. [2]
Identifiers
SymbolAcylphosphatase
Pfam PF00708
InterPro IPR001792
PROSITE PDOC00136
SCOP2 1aps / SCOPe / SUPFAM
Available protein structures:
Pfam   structures / ECOD  
PDB RCSB PDB; PDBe; PDBj
PDBsum structure summary
PDB 2GV1​, 1APS​, 2FHM​, 1Y9O​, 1URR​, 1W2I​, 2ACY​, 2BJD​, 1V3Z​, 2HLT​, 2HLU​, 2BJE​, 3BR8​, 1ULR

In enzymology, an acylphosphatase ( EC 3.6.1.7) is an enzyme that catalyzes the hydrolysis of the carboxyl-phosphate bond of acylphosphates, with acylphosphate and H2O as the two substrates of this enzyme, and carboxylate and phosphate as its two products: [3]

The chemical reaction catalyzed by acylphosphatase enzymes.

Function

This enzyme belongs to the family of hydrolases, specifically those acting on acid anhydrides in phosphorus-containing anhydrides. The systematic name of this enzyme class is acylphosphate phosphohydrolase. Other names in common use include acetylphosphatase, 1,3-diphosphoglycerate phosphatase, acetic phosphatase, Ho 1-3, and GP 1-3.

This enzyme participates in 3 metabolic pathways:

Structural studies

Structures of this enzyme have been solved by both NMR and X-ray crystallography. See the links to PDB structures in the info boxes on the right for a current list of structures available in the PDB. The protein contains a beta sheet stacked on two alpha helices described by CATH as an Alpha-Beta Plait fold. The active site sits between sheet and helices and contains an arginine and an asparagine. [4] Most structures are monomeric [5]

Isozymes

Humans express the following two acylphosphatase isozymes:

acylphosphatase 1, erythrocyte (common) type
Identifiers
Symbol ACYP1
NCBI gene 97
HGNC 179
OMIM 600875
RefSeq NM_001107
UniProt P07311
Other data
EC number 3.6.1.7
Locus Chr. 14 q24.3
Search for
Structures Swiss-model
Domains InterPro
acylphosphatase 2, muscle type
Identifiers
Symbol ACYP2
NCBI gene 98
HGNC 180
OMIM 102595
RefSeq NM_138448
UniProt P14621
Other data
EC number 3.6.1.7
Locus Chr. 2 p16.2
Search for
Structures Swiss-model
Domains InterPro

References

  1. ^ "RCSB Protein Data Bank - Structure Summary for 2W4P - HUMAN COMMON-TYPE ACYLPHOSPHATASE VARIANT, A99G".
  2. ^ Pastore A, Saudek V, Ramponi G, Williams RJ (March 1992). "Three-dimensional structure of acylphosphatase. Refinement and structure analysis". J. Mol. Biol. 224 (2): 427–40. doi: 10.1016/0022-2836(92)91005-A. PMID  1313885.
  3. ^ Stefani M, Taddei N, Ramponi G (February 1997). "Insights into acylphosphatase structure and catalytic mechanism". Cell. Mol. Life Sci. 53 (2): 141–51. doi: 10.1007/PL00000585. PMC  11147357. PMID  9118002. S2CID  24072481.
  4. ^ Gribenko AV, Patel MM, Liu J, McCallum SA, Wang C, Makhatadze GI (February 2009). "Rational stabilization of enzymes by computational redesign of surface charge-charge interactions". Proceedings of the National Academy of Sciences of the United States of America. 106 (8): 2601–6. Bibcode: 2009PNAS..106.2601G. doi: 10.1073/pnas.0808220106. PMC  2650310. PMID  19196981.
  5. ^ "Enzyme 3.6.1.7". PDBe Enzyme Browser.


From Wikipedia, the free encyclopedia
acylphosphatase
Identifiers
EC no. 3.6.1.7
CAS no. 9012-34-4
Databases
IntEnz IntEnz view
BRENDA BRENDA entry
ExPASy NiceZyme view
KEGG KEGG entry
MetaCyc metabolic pathway
PRIAM profile
PDB structures RCSB PDB PDBe PDBsum
Gene Ontology AmiGO / QuickGO
Search
PMC articles
PubMed articles
NCBI proteins
Acylphosphatase
Structure of acylphosphatase. [2]
Identifiers
SymbolAcylphosphatase
Pfam PF00708
InterPro IPR001792
PROSITE PDOC00136
SCOP2 1aps / SCOPe / SUPFAM
Available protein structures:
Pfam   structures / ECOD  
PDB RCSB PDB; PDBe; PDBj
PDBsum structure summary
PDB 2GV1​, 1APS​, 2FHM​, 1Y9O​, 1URR​, 1W2I​, 2ACY​, 2BJD​, 1V3Z​, 2HLT​, 2HLU​, 2BJE​, 3BR8​, 1ULR

In enzymology, an acylphosphatase ( EC 3.6.1.7) is an enzyme that catalyzes the hydrolysis of the carboxyl-phosphate bond of acylphosphates, with acylphosphate and H2O as the two substrates of this enzyme, and carboxylate and phosphate as its two products: [3]

The chemical reaction catalyzed by acylphosphatase enzymes.

Function

This enzyme belongs to the family of hydrolases, specifically those acting on acid anhydrides in phosphorus-containing anhydrides. The systematic name of this enzyme class is acylphosphate phosphohydrolase. Other names in common use include acetylphosphatase, 1,3-diphosphoglycerate phosphatase, acetic phosphatase, Ho 1-3, and GP 1-3.

This enzyme participates in 3 metabolic pathways:

Structural studies

Structures of this enzyme have been solved by both NMR and X-ray crystallography. See the links to PDB structures in the info boxes on the right for a current list of structures available in the PDB. The protein contains a beta sheet stacked on two alpha helices described by CATH as an Alpha-Beta Plait fold. The active site sits between sheet and helices and contains an arginine and an asparagine. [4] Most structures are monomeric [5]

Isozymes

Humans express the following two acylphosphatase isozymes:

acylphosphatase 1, erythrocyte (common) type
Identifiers
Symbol ACYP1
NCBI gene 97
HGNC 179
OMIM 600875
RefSeq NM_001107
UniProt P07311
Other data
EC number 3.6.1.7
Locus Chr. 14 q24.3
Search for
Structures Swiss-model
Domains InterPro
acylphosphatase 2, muscle type
Identifiers
Symbol ACYP2
NCBI gene 98
HGNC 180
OMIM 102595
RefSeq NM_138448
UniProt P14621
Other data
EC number 3.6.1.7
Locus Chr. 2 p16.2
Search for
Structures Swiss-model
Domains InterPro

References

  1. ^ "RCSB Protein Data Bank - Structure Summary for 2W4P - HUMAN COMMON-TYPE ACYLPHOSPHATASE VARIANT, A99G".
  2. ^ Pastore A, Saudek V, Ramponi G, Williams RJ (March 1992). "Three-dimensional structure of acylphosphatase. Refinement and structure analysis". J. Mol. Biol. 224 (2): 427–40. doi: 10.1016/0022-2836(92)91005-A. PMID  1313885.
  3. ^ Stefani M, Taddei N, Ramponi G (February 1997). "Insights into acylphosphatase structure and catalytic mechanism". Cell. Mol. Life Sci. 53 (2): 141–51. doi: 10.1007/PL00000585. PMC  11147357. PMID  9118002. S2CID  24072481.
  4. ^ Gribenko AV, Patel MM, Liu J, McCallum SA, Wang C, Makhatadze GI (February 2009). "Rational stabilization of enzymes by computational redesign of surface charge-charge interactions". Proceedings of the National Academy of Sciences of the United States of America. 106 (8): 2601–6. Bibcode: 2009PNAS..106.2601G. doi: 10.1073/pnas.0808220106. PMC  2650310. PMID  19196981.
  5. ^ "Enzyme 3.6.1.7". PDBe Enzyme Browser.



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