Patricia Babbitt | |
|---|---|
| Born | Patricia Clement Babbitt |
| Education | University of California, San Francisco (PhD) |
| Awards | ISCB Fellow (2018) [1] |
| Scientific career | |
| Fields |
Bioinformatics
[2] Computational biology [2] |
| Institutions | University of California, San Francisco |
| Thesis | Sequence determination, expression, and site-directed mutagenesis of creatine kinase (1988) |
| Doctoral advisor | George L. Kenyon
[3] Irwin Kuntz [3] |
| Website |
profiles |
Patricia Clement Babbitt is a Professor and Principal Investigator (PI) in the school of pharmacy at the University of California, San Francisco (UCSF). [2] [4] [5] [6] [7] [8]
Education
Patricia Babbitt earned a PhD in pharmaceutical chemistry in 1988 from the University of California, San Francisco [3] [4] for research supervised by George L. Kenyon and Irwin Kuntz. [3]
Career and research
Babbitt serves as the director of the UCSF bioinformatics and medical informatics graduate program.[ citation needed] She also serves on the advisory boards for the UniProt, InterPro [9] and MetaCyc databases, the Howard Hughes Medical Institute (HHMI) scientific review board, and as a deputy editor for PLOS Computational Biology. [10] Her research interests include bioinformatics and computational biology. [2] [8] [11]
Awards and honors
Babbitt was elected a Fellow of the International Society for Computational Biology (ISCB) in 2018 for “outstanding contributions to the fields of computational biology and bioinformatics”. [1]
References
- ^ a b Anon (2018). "ISCB Fellows". iscb.org. International Society for Computational Biology. Archived from the original on 2017-03-20. Retrieved 2018-03-14.
- ^ a b c d Patricia Babbitt publications indexed by Google Scholar
- ^ a b c d Babbit, Patricia Clement (1988). Sequence determination, expression, and site-directed mutagenesis of creatine kinase (PhD thesis). University of California, San Francisco. OCLC 19528718. ProQuest 303714424. (subscription required)
- ^ a b "Patricia Babbitt UCSF Profile". profiles.ucsf.edu.
- ^ "Babbitt Lab Website". babbittlab.ucsf.edu. Archived from the original on 2017-12-19. Retrieved 2018-03-14.
-
^ Gerlt, John A.; Babbitt, Patricia C. (2001). "Divergent Evolution of Enzymatic Function: Mechanistically Diverse Superfamilies and Functionally Distinct Suprafamilies".
Annual Review of Biochemistry. 70 (1): 209–246.
doi:
10.1146/annurev.biochem.70.1.209.
ISSN
0066-4154.
PMID
11395407.
-
^ Radivojac, Predrag; Clark, Wyatt T; Oron, Tal Ronnen; Schnoes, Alexandra M; Wittkop, Tobias; Sokolov, Artem; Graim, Kiley; Funk, Christopher; Verspoor, Karin; Ben-Hur, Asa; Pandey, Gaurav; Yunes, Jeffrey M; Talwalkar, Ameet S; et al. (2013).
"A large-scale evaluation of computational protein function prediction".
Nature Methods. 10 (3): 221–227.
doi:
10.1038/nmeth.2340.
ISSN
1548-7091.
PMC
3584181.
PMID
23353650.
- ^ a b Patricia Babbitt publications from Europe PubMed Central
- ^ Finn, Robert D.; Attwood, Teresa K.; Babbitt, Patricia C.; Bateman, Alex; Bork, Peer; Bridge, Alan J.; Chang, Hsin-Yu; Dosztányi, Zsuzsanna; El-Gebali, Sara; Fraser, Matthew; Gough, Julian; Haft, David; Holliday, Gemma L.; Huang, Hongzhan; Huang, Xiaosong; Letunic, Ivica; Lopez, Rodrigo; Lu, Shennan; Marchler-Bauer, Aron; Mi, Huaiyu; Mistry, Jaina; Natale, Darren A.; Necci, Marco; Nuka, Gift; Orengo, Christine A.; Park, Youngmi; Pesseat, Sebastien; Piovesan, Damiano; Potter, Simon C.; Rawlings, Neil D.; Redaschi, Nicole; Richardson, Lorna; Rivoire, Catherine; Sangrador-Vegas, Amaia; Sigrist, Christian; Sillitoe, Ian; Smithers, Ben; Squizzato, Silvano; Sutton, Granger; Thanki, Narmada; Thomas, Paul D; Tosatto, Silvio C. E.; Wu, Cathy H.; Xenarios, Ioannis; Yeh, Lai-Su; Young, Siew-Yit; Mitchell, Alex L. (2017). "InterPro in 2017—beyond protein family and domain annotations". Nucleic Acids Research. 45 (D1): D190–D199. doi: 10.1093/nar/gkw1107. ISSN 0305-1048. PMC 5210578. PMID 27899635.
- ^ "CMNS Distinguished Woman Faculty Lecture". umd.edu. University of Maryland.
- ^ Patricia Babbitt at DBLP Bibliography Server
| Authority control databases: Academics |
|---|
Patricia Babbitt | |
|---|---|
| Born | Patricia Clement Babbitt |
| Education | University of California, San Francisco (PhD) |
| Awards | ISCB Fellow (2018) [1] |
| Scientific career | |
| Fields |
Bioinformatics
[2] Computational biology [2] |
| Institutions | University of California, San Francisco |
| Thesis | Sequence determination, expression, and site-directed mutagenesis of creatine kinase (1988) |
| Doctoral advisor | George L. Kenyon
[3] Irwin Kuntz [3] |
| Website |
profiles |
Patricia Clement Babbitt is a Professor and Principal Investigator (PI) in the school of pharmacy at the University of California, San Francisco (UCSF). [2] [4] [5] [6] [7] [8]
Education
Patricia Babbitt earned a PhD in pharmaceutical chemistry in 1988 from the University of California, San Francisco [3] [4] for research supervised by George L. Kenyon and Irwin Kuntz. [3]
Career and research
Babbitt serves as the director of the UCSF bioinformatics and medical informatics graduate program.[ citation needed] She also serves on the advisory boards for the UniProt, InterPro [9] and MetaCyc databases, the Howard Hughes Medical Institute (HHMI) scientific review board, and as a deputy editor for PLOS Computational Biology. [10] Her research interests include bioinformatics and computational biology. [2] [8] [11]
Awards and honors
Babbitt was elected a Fellow of the International Society for Computational Biology (ISCB) in 2018 for “outstanding contributions to the fields of computational biology and bioinformatics”. [1]
References
- ^ a b Anon (2018). "ISCB Fellows". iscb.org. International Society for Computational Biology. Archived from the original on 2017-03-20. Retrieved 2018-03-14.
- ^ a b c d Patricia Babbitt publications indexed by Google Scholar
- ^ a b c d Babbit, Patricia Clement (1988). Sequence determination, expression, and site-directed mutagenesis of creatine kinase (PhD thesis). University of California, San Francisco. OCLC 19528718. ProQuest 303714424. (subscription required)
- ^ a b "Patricia Babbitt UCSF Profile". profiles.ucsf.edu.
- ^ "Babbitt Lab Website". babbittlab.ucsf.edu. Archived from the original on 2017-12-19. Retrieved 2018-03-14.
-
^ Gerlt, John A.; Babbitt, Patricia C. (2001). "Divergent Evolution of Enzymatic Function: Mechanistically Diverse Superfamilies and Functionally Distinct Suprafamilies".
Annual Review of Biochemistry. 70 (1): 209–246.
doi:
10.1146/annurev.biochem.70.1.209.
ISSN
0066-4154.
PMID
11395407.
-
^ Radivojac, Predrag; Clark, Wyatt T; Oron, Tal Ronnen; Schnoes, Alexandra M; Wittkop, Tobias; Sokolov, Artem; Graim, Kiley; Funk, Christopher; Verspoor, Karin; Ben-Hur, Asa; Pandey, Gaurav; Yunes, Jeffrey M; Talwalkar, Ameet S; et al. (2013).
"A large-scale evaluation of computational protein function prediction".
Nature Methods. 10 (3): 221–227.
doi:
10.1038/nmeth.2340.
ISSN
1548-7091.
PMC
3584181.
PMID
23353650.
- ^ a b Patricia Babbitt publications from Europe PubMed Central
- ^ Finn, Robert D.; Attwood, Teresa K.; Babbitt, Patricia C.; Bateman, Alex; Bork, Peer; Bridge, Alan J.; Chang, Hsin-Yu; Dosztányi, Zsuzsanna; El-Gebali, Sara; Fraser, Matthew; Gough, Julian; Haft, David; Holliday, Gemma L.; Huang, Hongzhan; Huang, Xiaosong; Letunic, Ivica; Lopez, Rodrigo; Lu, Shennan; Marchler-Bauer, Aron; Mi, Huaiyu; Mistry, Jaina; Natale, Darren A.; Necci, Marco; Nuka, Gift; Orengo, Christine A.; Park, Youngmi; Pesseat, Sebastien; Piovesan, Damiano; Potter, Simon C.; Rawlings, Neil D.; Redaschi, Nicole; Richardson, Lorna; Rivoire, Catherine; Sangrador-Vegas, Amaia; Sigrist, Christian; Sillitoe, Ian; Smithers, Ben; Squizzato, Silvano; Sutton, Granger; Thanki, Narmada; Thomas, Paul D; Tosatto, Silvio C. E.; Wu, Cathy H.; Xenarios, Ioannis; Yeh, Lai-Su; Young, Siew-Yit; Mitchell, Alex L. (2017). "InterPro in 2017—beyond protein family and domain annotations". Nucleic Acids Research. 45 (D1): D190–D199. doi: 10.1093/nar/gkw1107. ISSN 0305-1048. PMC 5210578. PMID 27899635.
- ^ "CMNS Distinguished Woman Faculty Lecture". umd.edu. University of Maryland.
- ^ Patricia Babbitt at DBLP Bibliography Server
| Authority control databases: Academics |
|---|