From Wikipedia, the free encyclopedia
POLR2E
Available structures
PDBOrtholog search: PDBe RCSB
Identifiers
Aliases POLR2E, RPABC1, RPB5, XAP4, hRPB25, hsRPB5, polymerase (RNA) II subunit E, RNA polymerase II subunit E, RNA polymerase II, I and III subunit E
External IDs OMIM: 180664; MGI: 1913670; HomoloGene: 2018; GeneCards: POLR2E; OMA: POLR2E - orthologs
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_002695
NM_001316323
NM_001316324

NM_025554

RefSeq (protein)

NP_001303252
NP_001303253
NP_002686

NP_079830

Location (UCSC) Chr 19: 1.09 – 1.1 Mb Chr 10: 79.87 – 79.88 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

DNA-directed RNA polymerases I, II, and III subunit RPABC1 is a protein that in humans is encoded by the POLR2E gene. [5]

This gene encodes the fifth largest subunit of RNA polymerase II, the polymerase responsible for synthesizing messenger RNA in eukaryotes. This subunit is shared by the other two DNA-directed RNA polymerases and is present in two-fold molar excess over the other polymerase subunits. An interaction between this subunit and a hepatitis virus transactivating protein has been demonstrated, suggesting that interaction between transcriptional activators and the polymerase can occur through this subunit. A pseudogene is located on chromosome 11. [6]

Interactions

POLR2E has been shown to interact with TAF15, [7] POLR2C, [8] POLR2G, [8] POLR2H, [8] POLR2A, [8] POLR2B, [8] POLR2L [8] and GTF2F2. [9]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000099817Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000004667Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Acker J, Mattei MG, Wintzerith M, Roeckel N, Depetris D, Vigneron M, Kedinger C (Aug 1994). "Chromosomal localization of human RNA polymerase II subunit genes". Genomics. 20 (3): 496–499. doi: 10.1006/geno.1994.1208. PMID  8034326.
  6. ^ "Entrez Gene: POLR2E polymerase (RNA) II (DNA directed) polypeptide E, 25kDa".
  7. ^ Bertolotti A, Melot T, Acker J, Vigneron M, Delattre O, Tora L (Mar 1998). "EWS, but not EWS-FLI-1, is associated with both TFIID and RNA polymerase II: interactions between two members of the TET family, EWS and hTAFII68, and subunits of TFIID and RNA polymerase II complexes". Mol. Cell. Biol. 18 (3). UNITED STATES: 1489–1497. doi: 10.1128/mcb.18.3.1489. ISSN  0270-7306. PMC  108863. PMID  9488465.
  8. ^ a b c d e f Acker J, de Graaff M, Cheynel I, Khazak V, Kedinger C, Vigneron M (Jul 1997). "Interactions between the human RNA polymerase II subunits". J. Biol. Chem. 272 (27). UNITED STATES: 16815–16821. doi: 10.1074/jbc.272.27.16815. ISSN  0021-9258. PMID  9201987.
  9. ^ Wei W, Dorjsuren D, Lin Y, Qin W, Nomura T, Hayashi N, Murakami S (Apr 2001). "Direct interaction between the subunit RAP30 of transcription factor IIF (TFIIF) and RNA polymerase subunit 5, which contributes to the association between TFIIF and RNA polymerase II". J. Biol. Chem. 276 (15). United States: 12266–12273. doi: 10.1074/jbc.M009634200. ISSN  0021-9258. PMID  11278533.

Further reading

From Wikipedia, the free encyclopedia
POLR2E
Available structures
PDBOrtholog search: PDBe RCSB
Identifiers
Aliases POLR2E, RPABC1, RPB5, XAP4, hRPB25, hsRPB5, polymerase (RNA) II subunit E, RNA polymerase II subunit E, RNA polymerase II, I and III subunit E
External IDs OMIM: 180664; MGI: 1913670; HomoloGene: 2018; GeneCards: POLR2E; OMA: POLR2E - orthologs
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_002695
NM_001316323
NM_001316324

NM_025554

RefSeq (protein)

NP_001303252
NP_001303253
NP_002686

NP_079830

Location (UCSC) Chr 19: 1.09 – 1.1 Mb Chr 10: 79.87 – 79.88 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

DNA-directed RNA polymerases I, II, and III subunit RPABC1 is a protein that in humans is encoded by the POLR2E gene. [5]

This gene encodes the fifth largest subunit of RNA polymerase II, the polymerase responsible for synthesizing messenger RNA in eukaryotes. This subunit is shared by the other two DNA-directed RNA polymerases and is present in two-fold molar excess over the other polymerase subunits. An interaction between this subunit and a hepatitis virus transactivating protein has been demonstrated, suggesting that interaction between transcriptional activators and the polymerase can occur through this subunit. A pseudogene is located on chromosome 11. [6]

Interactions

POLR2E has been shown to interact with TAF15, [7] POLR2C, [8] POLR2G, [8] POLR2H, [8] POLR2A, [8] POLR2B, [8] POLR2L [8] and GTF2F2. [9]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000099817Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000004667Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Acker J, Mattei MG, Wintzerith M, Roeckel N, Depetris D, Vigneron M, Kedinger C (Aug 1994). "Chromosomal localization of human RNA polymerase II subunit genes". Genomics. 20 (3): 496–499. doi: 10.1006/geno.1994.1208. PMID  8034326.
  6. ^ "Entrez Gene: POLR2E polymerase (RNA) II (DNA directed) polypeptide E, 25kDa".
  7. ^ Bertolotti A, Melot T, Acker J, Vigneron M, Delattre O, Tora L (Mar 1998). "EWS, but not EWS-FLI-1, is associated with both TFIID and RNA polymerase II: interactions between two members of the TET family, EWS and hTAFII68, and subunits of TFIID and RNA polymerase II complexes". Mol. Cell. Biol. 18 (3). UNITED STATES: 1489–1497. doi: 10.1128/mcb.18.3.1489. ISSN  0270-7306. PMC  108863. PMID  9488465.
  8. ^ a b c d e f Acker J, de Graaff M, Cheynel I, Khazak V, Kedinger C, Vigneron M (Jul 1997). "Interactions between the human RNA polymerase II subunits". J. Biol. Chem. 272 (27). UNITED STATES: 16815–16821. doi: 10.1074/jbc.272.27.16815. ISSN  0021-9258. PMID  9201987.
  9. ^ Wei W, Dorjsuren D, Lin Y, Qin W, Nomura T, Hayashi N, Murakami S (Apr 2001). "Direct interaction between the subunit RAP30 of transcription factor IIF (TFIIF) and RNA polymerase subunit 5, which contributes to the association between TFIIF and RNA polymerase II". J. Biol. Chem. 276 (15). United States: 12266–12273. doi: 10.1074/jbc.M009634200. ISSN  0021-9258. PMID  11278533.

Further reading


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