From Wikipedia, the free encyclopedia
PreQ1 synthase
Identifiers
EC no. 1.7.1.13
Databases
IntEnz IntEnz view
BRENDA BRENDA entry
ExPASy NiceZyme view
KEGG KEGG entry
MetaCyc metabolic pathway
PRIAM profile
PDB structures RCSB PDB PDBe PDBsum
Search
PMC articles
PubMed articles
NCBI proteins

In enzymology, a preQ1 synthase ( EC 1.7.1.13) is an enzyme that catalyzes the chemical reaction

7-aminomethyl-7-carbaguanine + 2 NADP+ 7-cyano-7-carbaguanine + 2 NADPH + 2 H+

Thus, the two substrates of this enzyme are 7-aminomethyl-7-carbaguanine and NADP+, whereas its 3 products are 7-cyano-7-carbaguanine, NADPH, and H+.

This enzyme belongs to the family of oxidoreductases, specifically those acting on other nitrogenous compounds as donors with NAD+ or NADP+ as acceptor. The systematic name of this enzyme class is 7-aminomethyl-7-carbaguanine:NADP+ oxidoreductase. Other names in common use include YkvM, QueF, preQ0 reductase, preQ0 oxidoreductase, 7-cyano-7-deazaguanine reductase, 7-aminomethyl-7-carbaguanine:NADP+ oxidoreductase, queuine synthase (incorrect as queuine is not the product), and queuine:NADP+ oxidoreductase (incorrect as queuine is not the product).

References

  • Iwata-Reuyl D; Reader, JS; Swairjo, MA; De Crécy-Lagard, V; Lee, B; Iwata-Reuyl, D (2005). "From cyclohydrolase to oxidoreductase: Discovery of nitrile reductase activity in a common fold". Proc. Natl. Acad. Sci. U.S.A. 102 (12): 4264–9. Bibcode: 2005PNAS..102.4264V. doi: 10.1073/pnas.0408056102. PMC  555470. PMID  15767583.
  • Yokoyama S, Miyazawa T, Iitaka Y, Yamaizumi Z, Kasai H, Nishimura S (1979). "Three-dimensional structure of hyper-modified nucleoside Q located in the wobbling position of tRNA". Nature. 282 (5734): 107–9. Bibcode: 1979Natur.282..107Y. doi: 10.1038/282107a0. PMID  388227. S2CID  4313325.
  • Kuchino Y, Kasai H, Nihei K, Nishimura S (1976). "Biosynthesis of the modified nucleoside Q in transfer RNA". Nucleic Acids Res. 3 (2): 393–8. doi: 10.1093/nar/3.2.393. PMC  342909. PMID  1257053.
  • JA; Noguchi, S; Nishimura, S; Ohgi, T; Goto, T; Crain, PF; McCloskey, JA (1978). "Structure determination of a nucleoside Q precursor isolated from E. coli tRNA: 7-(aminomethyl)-7-deazaguanosine". Nucleic Acids Res. 5 (7): 2289–96. doi: 10.1093/nar/5.7.2289. PMC  342163. PMID  353740.
  • Nishimura S; Yamaizumi, Z; Ohgi, T; Goto, T; Nishimura, Y; Hirota, Y; Nishimura, S (1978). "Isolation of Q nucleoside precursor present in tRNA of an E. coli mutant and its characterization as 7-(cyano)-7-deazaguanosine". Nucleic Acids Res. 5 (11): 4215–23. doi: 10.1093/nar/5.11.4215. PMC  342744. PMID  364423.
  • Swairjo M.A.; Reddy R.R.; Lee B.; Van Lanen S.G.; Brown S.; de Crécy-Lagard V.; Iwata-Reuyl D, Schimmel P; preliminary X-ray characterization of the nitrile reductase QueF: a queuosine-biosynthesis enzyme (2005). "Crystallization". Acta Crystallogr. F. 61 (Pt 10): 945–8. doi: 10.1107/S1744309105029246. PMC  1991305. PMID  16511203.
  • Chikwana, V.M.; Stec, B.; Lee, B.W.K.; de Crécy-Lagard, V.; Iwata-Reuyl, D.; Swairjo, M.A. (2012). "Structural basis of biological nitrile reduction". Journal of Biological Chemistry. 287 (36): 30560–70. doi: 10.1074/jbc.m112.388538. PMC  3436371. PMID  22787148.


From Wikipedia, the free encyclopedia
PreQ1 synthase
Identifiers
EC no. 1.7.1.13
Databases
IntEnz IntEnz view
BRENDA BRENDA entry
ExPASy NiceZyme view
KEGG KEGG entry
MetaCyc metabolic pathway
PRIAM profile
PDB structures RCSB PDB PDBe PDBsum
Search
PMC articles
PubMed articles
NCBI proteins

In enzymology, a preQ1 synthase ( EC 1.7.1.13) is an enzyme that catalyzes the chemical reaction

7-aminomethyl-7-carbaguanine + 2 NADP+ 7-cyano-7-carbaguanine + 2 NADPH + 2 H+

Thus, the two substrates of this enzyme are 7-aminomethyl-7-carbaguanine and NADP+, whereas its 3 products are 7-cyano-7-carbaguanine, NADPH, and H+.

This enzyme belongs to the family of oxidoreductases, specifically those acting on other nitrogenous compounds as donors with NAD+ or NADP+ as acceptor. The systematic name of this enzyme class is 7-aminomethyl-7-carbaguanine:NADP+ oxidoreductase. Other names in common use include YkvM, QueF, preQ0 reductase, preQ0 oxidoreductase, 7-cyano-7-deazaguanine reductase, 7-aminomethyl-7-carbaguanine:NADP+ oxidoreductase, queuine synthase (incorrect as queuine is not the product), and queuine:NADP+ oxidoreductase (incorrect as queuine is not the product).

References

  • Iwata-Reuyl D; Reader, JS; Swairjo, MA; De Crécy-Lagard, V; Lee, B; Iwata-Reuyl, D (2005). "From cyclohydrolase to oxidoreductase: Discovery of nitrile reductase activity in a common fold". Proc. Natl. Acad. Sci. U.S.A. 102 (12): 4264–9. Bibcode: 2005PNAS..102.4264V. doi: 10.1073/pnas.0408056102. PMC  555470. PMID  15767583.
  • Yokoyama S, Miyazawa T, Iitaka Y, Yamaizumi Z, Kasai H, Nishimura S (1979). "Three-dimensional structure of hyper-modified nucleoside Q located in the wobbling position of tRNA". Nature. 282 (5734): 107–9. Bibcode: 1979Natur.282..107Y. doi: 10.1038/282107a0. PMID  388227. S2CID  4313325.
  • Kuchino Y, Kasai H, Nihei K, Nishimura S (1976). "Biosynthesis of the modified nucleoside Q in transfer RNA". Nucleic Acids Res. 3 (2): 393–8. doi: 10.1093/nar/3.2.393. PMC  342909. PMID  1257053.
  • JA; Noguchi, S; Nishimura, S; Ohgi, T; Goto, T; Crain, PF; McCloskey, JA (1978). "Structure determination of a nucleoside Q precursor isolated from E. coli tRNA: 7-(aminomethyl)-7-deazaguanosine". Nucleic Acids Res. 5 (7): 2289–96. doi: 10.1093/nar/5.7.2289. PMC  342163. PMID  353740.
  • Nishimura S; Yamaizumi, Z; Ohgi, T; Goto, T; Nishimura, Y; Hirota, Y; Nishimura, S (1978). "Isolation of Q nucleoside precursor present in tRNA of an E. coli mutant and its characterization as 7-(cyano)-7-deazaguanosine". Nucleic Acids Res. 5 (11): 4215–23. doi: 10.1093/nar/5.11.4215. PMC  342744. PMID  364423.
  • Swairjo M.A.; Reddy R.R.; Lee B.; Van Lanen S.G.; Brown S.; de Crécy-Lagard V.; Iwata-Reuyl D, Schimmel P; preliminary X-ray characterization of the nitrile reductase QueF: a queuosine-biosynthesis enzyme (2005). "Crystallization". Acta Crystallogr. F. 61 (Pt 10): 945–8. doi: 10.1107/S1744309105029246. PMC  1991305. PMID  16511203.
  • Chikwana, V.M.; Stec, B.; Lee, B.W.K.; de Crécy-Lagard, V.; Iwata-Reuyl, D.; Swairjo, M.A. (2012). "Structural basis of biological nitrile reduction". Journal of Biological Chemistry. 287 (36): 30560–70. doi: 10.1074/jbc.m112.388538. PMC  3436371. PMID  22787148.



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