The Lachnospiraceae are a family of obligately anaerobic, variably spore-forming bacteria in the order Eubacteriales that ferment diverse plant polysaccharides [11] to short-chain fatty acids (butyrate, acetate) and alcohols (ethanol). These bacteria are among the most abundant taxa in the rumen [12] and the human gut microbiota. [3] [13] [14] [15] Members of this family may protect against colon cancer in humans by producing butyric acid. [16] [17] Lachnospiraceae have been found to contribute to diabetes in genetically susceptible (ob/ob) germ-free mice. [18]
References
- ^ LPSN lpsn.dsmz.de
- ^ "Abyssivirga". www.uniprot.org.
- ^ a b c d e f g h i j k l m n o eol
- ^ "Agathobacter". www.uniprot.org.
- ^ "Cuneatibacter". www.uniprot.org.
-
^ Parker, Charles Thomas; Garrity, George M (1 January 2003). Parker, Charles Thomas; Garrity, George M (eds.). "Taxonomic Abstract for the genera". The NamesforLife Abstracts.
doi:
10.1601/tx.25197 (inactive 2024-04-17).
{{ cite journal}}: CS1 maint: DOI inactive as of April 2024 ( link) -
^ Parker, Charles Thomas; Garrity, George M (2017). Parker, Charles Thomas; Garrity, George M (eds.). "Nomenclature Abstract for Faecalicatena Sakamoto et al. 2016". The NamesforLife Abstracts.
doi:
10.1601/nm.29879 (inactive 2024-04-17).
{{ cite journal}}: CS1 maint: DOI inactive as of April 2024 ( link) -
^ Parker, Charles Thomas; Garrity, George M (2017). Parker, Charles Thomas; Garrity, George M (eds.). "Nomenclature Abstract for Faecalimonas Sakamoto et al. 2016". The NamesforLife Abstracts.
doi:
10.1601/nm.29877 (inactive 2024-04-17).
{{ cite journal}}: CS1 maint: DOI inactive as of April 2024 ( link) - ^ UniProt
- ^ "Family - L". List of Prokaryotic Names with Standing in Nomenclature. Retrieved 30 March 2021.
- ^ Boutard, M; Cerisy, T (13 November 2014). "Functional Diversity of Carbohydrate-Active Enzymes Enabling a Bacterium to Ferment Plant Biomass". PLOS Genetics. 10 (11): e1004773. doi: 10.1371/journal.pgen.1004773. PMC 4230839. PMID 25393313.
- ^ Seshadri, R; Leahy, SC (19 March 2018). "Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection". Nature Biotechnology. 36 (4): 359–367. doi: 10.1038/nbt.4110. PMC 6118326. PMID 29553575.
- ^ Phyllis Kanki; Darrell Jay Grimes, eds. (2013). Infectious diseases selected entries from the Encyclopedia of sustainability science and technology. New York: Springer. ISBN 978-1-4614-5719-0.
- ^ UniProt
- ^ Paul De Vos; et al., eds. (2009). Bergey's manual of systematic bacteriology (2nd ed.). Dordrecht: Springer. ISBN 978-0-387-68489-5.
- ^ Meehan, C. J.; Beiko, R. G. (12 March 2014). "A Phylogenomic View of Ecological Specialization in the Lachnospiraceae, a Family of Digestive Tract-Associated Bacteria". Genome Biology and Evolution. 6 (3): 703–713. doi: 10.1093/gbe/evu050. PMC 3971600. PMID 24625961.
- ^ Xia, Li C.; Liu, Gang; Gao, Yingxin; Li, Xiaoxin; Pan, Hongfei; Ai, Dongmei (2019). "Identifying Gut Microbiota Associated With Colorectal Cancer Using a Zero-Inflated Lognormal Model". Frontiers in Microbiology. 10: 826. doi: 10.3389/fmicb.2019.00826. ISSN 1664-302X. PMC 6491826. PMID 31068913.
- ^ Kameyama, Keishi; Itoh, Kikuji (2014). "Intestinal Colonization by a Lachnospiraceae Bacterium Contributes to the Development of Diabetes in Obese Mice". Microbes and Environments. 29 (4): 427–430. doi: 10.1264/jsme2.ME14054. ISSN 1342-6311. PMC 4262368. PMID 25283478.
Further reading
Wikispecies has information related to
Lachnospiraceae.
- Newton, R. J.; VandeWalle, J. L.; Borchardt, M. A.; Gorelick, M. H.; McLellan, S. L. (29 July 2011). "Lachnospiraceae and Bacteroidales Alternative Fecal Indicators Reveal Chronic Human Sewage Contamination in an Urban Harbor". Applied and Environmental Microbiology. 77 (19): 6972–6981. Bibcode: 2011ApEnM..77.6972N. doi: 10.1128/AEM.05480-11. PMC 3187108. PMID 21803887.
- Kameyama, Keishi; Itoh, Kikuji (2014). "Intestinal Colonization by a Lachnospiraceae Bacterium Contributes to the Development of Diabetes in Obese Mice". Microbes and Environments. 29 (4): 427–430. doi: 10.1264/jsme2.ME14054. PMC 4262368. PMID 25283478.
- Paul De Vos; et al., eds. (2009). Bergey's manual of systematic bacteriology (2nd ed.). Dordrecht: Springer. ISBN 978-0-387-68489-5.
- Almeida, edited by Susan S. Cho, Nelson (2012). Dietary fiber and health. Boca Raton: CRC Press.
ISBN
978-1-4398-9929-8.
{{ cite book}}:|first1=has generic name ( help)CS1 maint: multiple names: authors list ( link) - Olsen, LeighAnne; Choffnes, Eileen R.; Academies, Alison Mack, rapporteurs ; Forum on Microbial Threats, Board on Global Health, Institute of Medicine of the National (2012). The social biology of microbial communities : workshop summary. Washington, D.C.: National Academies Press.
ISBN
978-0-309-26432-7.
{{ cite book}}: CS1 maint: multiple names: authors list ( link) - Nelson, Karen E.; Peterson, editor ; foreword by Jane L.; Garges, Susan (2011). Metagenomics of the human body. New York: Springer.
ISBN
978-1-4419-7089-3.
{{ cite book}}:|first2=has generic name ( help)CS1 maint: multiple names: authors list ( link)
The Lachnospiraceae are a family of obligately anaerobic, variably spore-forming bacteria in the order Eubacteriales that ferment diverse plant polysaccharides [11] to short-chain fatty acids (butyrate, acetate) and alcohols (ethanol). These bacteria are among the most abundant taxa in the rumen [12] and the human gut microbiota. [3] [13] [14] [15] Members of this family may protect against colon cancer in humans by producing butyric acid. [16] [17] Lachnospiraceae have been found to contribute to diabetes in genetically susceptible (ob/ob) germ-free mice. [18]
References
- ^ LPSN lpsn.dsmz.de
- ^ "Abyssivirga". www.uniprot.org.
- ^ a b c d e f g h i j k l m n o eol
- ^ "Agathobacter". www.uniprot.org.
- ^ "Cuneatibacter". www.uniprot.org.
-
^ Parker, Charles Thomas; Garrity, George M (1 January 2003). Parker, Charles Thomas; Garrity, George M (eds.). "Taxonomic Abstract for the genera". The NamesforLife Abstracts.
doi:
10.1601/tx.25197 (inactive 2024-04-17).
{{ cite journal}}: CS1 maint: DOI inactive as of April 2024 ( link) -
^ Parker, Charles Thomas; Garrity, George M (2017). Parker, Charles Thomas; Garrity, George M (eds.). "Nomenclature Abstract for Faecalicatena Sakamoto et al. 2016". The NamesforLife Abstracts.
doi:
10.1601/nm.29879 (inactive 2024-04-17).
{{ cite journal}}: CS1 maint: DOI inactive as of April 2024 ( link) -
^ Parker, Charles Thomas; Garrity, George M (2017). Parker, Charles Thomas; Garrity, George M (eds.). "Nomenclature Abstract for Faecalimonas Sakamoto et al. 2016". The NamesforLife Abstracts.
doi:
10.1601/nm.29877 (inactive 2024-04-17).
{{ cite journal}}: CS1 maint: DOI inactive as of April 2024 ( link) - ^ UniProt
- ^ "Family - L". List of Prokaryotic Names with Standing in Nomenclature. Retrieved 30 March 2021.
- ^ Boutard, M; Cerisy, T (13 November 2014). "Functional Diversity of Carbohydrate-Active Enzymes Enabling a Bacterium to Ferment Plant Biomass". PLOS Genetics. 10 (11): e1004773. doi: 10.1371/journal.pgen.1004773. PMC 4230839. PMID 25393313.
- ^ Seshadri, R; Leahy, SC (19 March 2018). "Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection". Nature Biotechnology. 36 (4): 359–367. doi: 10.1038/nbt.4110. PMC 6118326. PMID 29553575.
- ^ Phyllis Kanki; Darrell Jay Grimes, eds. (2013). Infectious diseases selected entries from the Encyclopedia of sustainability science and technology. New York: Springer. ISBN 978-1-4614-5719-0.
- ^ UniProt
- ^ Paul De Vos; et al., eds. (2009). Bergey's manual of systematic bacteriology (2nd ed.). Dordrecht: Springer. ISBN 978-0-387-68489-5.
- ^ Meehan, C. J.; Beiko, R. G. (12 March 2014). "A Phylogenomic View of Ecological Specialization in the Lachnospiraceae, a Family of Digestive Tract-Associated Bacteria". Genome Biology and Evolution. 6 (3): 703–713. doi: 10.1093/gbe/evu050. PMC 3971600. PMID 24625961.
- ^ Xia, Li C.; Liu, Gang; Gao, Yingxin; Li, Xiaoxin; Pan, Hongfei; Ai, Dongmei (2019). "Identifying Gut Microbiota Associated With Colorectal Cancer Using a Zero-Inflated Lognormal Model". Frontiers in Microbiology. 10: 826. doi: 10.3389/fmicb.2019.00826. ISSN 1664-302X. PMC 6491826. PMID 31068913.
- ^ Kameyama, Keishi; Itoh, Kikuji (2014). "Intestinal Colonization by a Lachnospiraceae Bacterium Contributes to the Development of Diabetes in Obese Mice". Microbes and Environments. 29 (4): 427–430. doi: 10.1264/jsme2.ME14054. ISSN 1342-6311. PMC 4262368. PMID 25283478.
Further reading
Wikispecies has information related to
Lachnospiraceae.
- Newton, R. J.; VandeWalle, J. L.; Borchardt, M. A.; Gorelick, M. H.; McLellan, S. L. (29 July 2011). "Lachnospiraceae and Bacteroidales Alternative Fecal Indicators Reveal Chronic Human Sewage Contamination in an Urban Harbor". Applied and Environmental Microbiology. 77 (19): 6972–6981. Bibcode: 2011ApEnM..77.6972N. doi: 10.1128/AEM.05480-11. PMC 3187108. PMID 21803887.
- Kameyama, Keishi; Itoh, Kikuji (2014). "Intestinal Colonization by a Lachnospiraceae Bacterium Contributes to the Development of Diabetes in Obese Mice". Microbes and Environments. 29 (4): 427–430. doi: 10.1264/jsme2.ME14054. PMC 4262368. PMID 25283478.
- Paul De Vos; et al., eds. (2009). Bergey's manual of systematic bacteriology (2nd ed.). Dordrecht: Springer. ISBN 978-0-387-68489-5.
- Almeida, edited by Susan S. Cho, Nelson (2012). Dietary fiber and health. Boca Raton: CRC Press.
ISBN
978-1-4398-9929-8.
{{ cite book}}:|first1=has generic name ( help)CS1 maint: multiple names: authors list ( link) - Olsen, LeighAnne; Choffnes, Eileen R.; Academies, Alison Mack, rapporteurs ; Forum on Microbial Threats, Board on Global Health, Institute of Medicine of the National (2012). The social biology of microbial communities : workshop summary. Washington, D.C.: National Academies Press.
ISBN
978-0-309-26432-7.
{{ cite book}}: CS1 maint: multiple names: authors list ( link) - Nelson, Karen E.; Peterson, editor ; foreword by Jane L.; Garges, Susan (2011). Metagenomics of the human body. New York: Springer.
ISBN
978-1-4419-7089-3.
{{ cite book}}:|first2=has generic name ( help)CS1 maint: multiple names: authors list ( link)