From Wikipedia, the free encyclopedia
D-Aspartate ligase
Identifiers
EC no. 6.3.1.12
Databases
IntEnz IntEnz view
BRENDA BRENDA entry
ExPASy NiceZyme view
KEGG KEGG entry
MetaCyc metabolic pathway
PRIAM profile
PDB structures RCSB PDB PDBe PDBsum
Search
PMC articles
PubMed articles
NCBI proteins

In enzymology, a D-aspartate ligase ( EC 6.3.1.12) is an enzyme that catalyzes the chemical reaction

ATP + D-aspartate + [beta-GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D- Ala)]n [beta-GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-6-N-(beta-D-Asp)-L- Lys-D-Ala-D-Ala)]n + ADP + phosphate

The 4 substrates of this enzyme are ATP, D-aspartate, [[beta-GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-]], and [[Ala)]n]], whereas its 4 products are [[beta-GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-6-N-(beta-D-Asp)-L-]], [[Lys-D-Ala-D-Ala)]n]], ADP, and phosphate.

This enzyme belongs to the family of ligases, specifically those forming carbon-nitrogen bonds as acid-D-ammonia (or amine) ligases (amide synthases). The systematic name of this enzyme class is D-aspartate:[beta-GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D -Ala-D-Ala)]n ligase (ADP-forming). Other names in common use include Aslfm, UDP-MurNAc-pentapeptide:D-aspartate ligase, and D-aspartic acid-activating enzyme.

References

  • Staudenbauer W, Strominger JL (1972). "Activation of D-aspartic acid for incorporation into peptidoglycan". J. Biol. Chem. 247 (16): 5095–102. PMID  4262567.
  • Staudenbauer W, Willoughby E, Strominger JL (1972). "Further studies of the D-aspartic acid-activating enzyme of Streptococcus faecalis and its attachment to the membrane". J. Biol. Chem. 247 (17): 5289–96. PMID  4626717.
  • Galperin MY, Koonin EV (1997). "A diverse superfamily of enzymes with ATP-dependent carboxylate-amine/thiol ligase activity". Protein Sci. 6 (12): 2639–43. doi: 10.1002/pro.5560061218. PMC  2143612. PMID  9416615.
  • Heijenoort J, Legrand R, Brouard JP, Rice L, Mainardi JL (2006). "Aslfm, the D-aspartate ligase responsible for the addition of D-aspartic acid onto the peptidoglycan precursor of Enterococcus faecium". J. Biol. Chem. 281 (17): 11586–94. doi: 10.1074/jbc.M600114200. PMID  16510449.


From Wikipedia, the free encyclopedia
D-Aspartate ligase
Identifiers
EC no. 6.3.1.12
Databases
IntEnz IntEnz view
BRENDA BRENDA entry
ExPASy NiceZyme view
KEGG KEGG entry
MetaCyc metabolic pathway
PRIAM profile
PDB structures RCSB PDB PDBe PDBsum
Search
PMC articles
PubMed articles
NCBI proteins

In enzymology, a D-aspartate ligase ( EC 6.3.1.12) is an enzyme that catalyzes the chemical reaction

ATP + D-aspartate + [beta-GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D- Ala)]n [beta-GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-6-N-(beta-D-Asp)-L- Lys-D-Ala-D-Ala)]n + ADP + phosphate

The 4 substrates of this enzyme are ATP, D-aspartate, [[beta-GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-]], and [[Ala)]n]], whereas its 4 products are [[beta-GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-6-N-(beta-D-Asp)-L-]], [[Lys-D-Ala-D-Ala)]n]], ADP, and phosphate.

This enzyme belongs to the family of ligases, specifically those forming carbon-nitrogen bonds as acid-D-ammonia (or amine) ligases (amide synthases). The systematic name of this enzyme class is D-aspartate:[beta-GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D -Ala-D-Ala)]n ligase (ADP-forming). Other names in common use include Aslfm, UDP-MurNAc-pentapeptide:D-aspartate ligase, and D-aspartic acid-activating enzyme.

References

  • Staudenbauer W, Strominger JL (1972). "Activation of D-aspartic acid for incorporation into peptidoglycan". J. Biol. Chem. 247 (16): 5095–102. PMID  4262567.
  • Staudenbauer W, Willoughby E, Strominger JL (1972). "Further studies of the D-aspartic acid-activating enzyme of Streptococcus faecalis and its attachment to the membrane". J. Biol. Chem. 247 (17): 5289–96. PMID  4626717.
  • Galperin MY, Koonin EV (1997). "A diverse superfamily of enzymes with ATP-dependent carboxylate-amine/thiol ligase activity". Protein Sci. 6 (12): 2639–43. doi: 10.1002/pro.5560061218. PMC  2143612. PMID  9416615.
  • Heijenoort J, Legrand R, Brouard JP, Rice L, Mainardi JL (2006). "Aslfm, the D-aspartate ligase responsible for the addition of D-aspartic acid onto the peptidoglycan precursor of Enterococcus faecium". J. Biol. Chem. 281 (17): 11586–94. doi: 10.1074/jbc.M600114200. PMID  16510449.



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