From Wikipedia, the free encyclopedia
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase (CofG)
Identifiers
EC no. 4.3.1.32
Databases
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ExPASy NiceZyme view
KEGG KEGG entry
MetaCyc metabolic pathway
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5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase (CofH)
Identifiers
EC no. 2.5.1.147
Databases
IntEnz IntEnz view
BRENDA BRENDA entry
ExPASy NiceZyme view
KEGG KEGG entry
MetaCyc metabolic pathway
PRIAM profile
PDB structures RCSB PDB PDBe PDBsum
Search
PMC articles
PubMed articles
NCBI proteins

7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase ( EC 4.3.1.32, FO synthase) and 5-amino-6-(D-ribitylamino)uracil—L-tyrosine 4-hydroxyphenyl transferase ( EC 2.5.1.147) are two enzymes always complexed together to achieve synthesis of FO, a precursor to Coenzyme F420. Their systematic names are 5-amino-5-(4-hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil ammonia-lyase (7,8-didemethyl-8-hydroxy-5-deazariboflavin-forming) and 5-amino-6-(D-ribitylamino)uracil:L-tyrosine, 4-hydroxyphenyl transferase respectively. [1] [2] The enzymes catalyse the following chemical reactions:

(2.5.1.147) 5-amino-6-(D-ribitylamino)uracil + L- tyrosine + S-adenosyl-L-methionine = 5-amino-5-(4-hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil + 2-iminoacetate + L- methionine + 5'-deoxyadenosin
(4.3.1.32) 5-amino-5-(4-hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil + S-adenosyl-L-methionine = 7,8-didemethyl-8-hydroxy-5-deazariboflavin + NH3 + L-methionine + 5'-deoxyadenosine

Enzyme 2.5.1.147 binds a 4Fe-4S cluster. The condensation reaction is initiated by the 5'-deoxyadenosyl radical. The complex was formerly named as a single entity under EC 2.5.1.77.

CofG
Identifiers
SymbolCofG
InterPro IPR019939
CofH
Identifiers
SymbolCofH
InterPro IPR019940

All members of these enzymes belong to a single clade of the CofH (2.5.1.147) and CofG (4.3.1.32) families, sharing a TIM barrel structure. The two EC numbers represent discrete steps in this reaction. Some enzyme complexes have CofG and CofH (subunits 1 and 2) in different chains assembled into a heterodimer, while others like the bifunctional fbiC has the two domains on one single chain.

References

  1. ^ Graham DE, Xu H, White RH (December 2003). "Identification of the 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase required for coenzyme F(420) biosynthesis". Archives of Microbiology. 180 (6): 455–64. doi: 10.1007/s00203-003-0614-8. PMID  14593448.
  2. ^ Choi KP, Kendrick N, Daniels L (May 2002). "Demonstration that fbiC is required by Mycobacterium bovis BCG for coenzyme F(420) and FO biosynthesis". Journal of Bacteriology. 184 (9): 2420–8. doi: 10.1128/JB.184.9.2420-2428.2002. PMC  134996. PMID  11948155.
From Wikipedia, the free encyclopedia
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase (CofG)
Identifiers
EC no. 4.3.1.32
Databases
IntEnz IntEnz view
BRENDA BRENDA entry
ExPASy NiceZyme view
KEGG KEGG entry
MetaCyc metabolic pathway
PRIAM profile
PDB structures RCSB PDB PDBe PDBsum
Gene Ontology AmiGO / QuickGO
Search
PMC articles
PubMed articles
NCBI proteins
5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase (CofH)
Identifiers
EC no. 2.5.1.147
Databases
IntEnz IntEnz view
BRENDA BRENDA entry
ExPASy NiceZyme view
KEGG KEGG entry
MetaCyc metabolic pathway
PRIAM profile
PDB structures RCSB PDB PDBe PDBsum
Search
PMC articles
PubMed articles
NCBI proteins

7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase ( EC 4.3.1.32, FO synthase) and 5-amino-6-(D-ribitylamino)uracil—L-tyrosine 4-hydroxyphenyl transferase ( EC 2.5.1.147) are two enzymes always complexed together to achieve synthesis of FO, a precursor to Coenzyme F420. Their systematic names are 5-amino-5-(4-hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil ammonia-lyase (7,8-didemethyl-8-hydroxy-5-deazariboflavin-forming) and 5-amino-6-(D-ribitylamino)uracil:L-tyrosine, 4-hydroxyphenyl transferase respectively. [1] [2] The enzymes catalyse the following chemical reactions:

(2.5.1.147) 5-amino-6-(D-ribitylamino)uracil + L- tyrosine + S-adenosyl-L-methionine = 5-amino-5-(4-hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil + 2-iminoacetate + L- methionine + 5'-deoxyadenosin
(4.3.1.32) 5-amino-5-(4-hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil + S-adenosyl-L-methionine = 7,8-didemethyl-8-hydroxy-5-deazariboflavin + NH3 + L-methionine + 5'-deoxyadenosine

Enzyme 2.5.1.147 binds a 4Fe-4S cluster. The condensation reaction is initiated by the 5'-deoxyadenosyl radical. The complex was formerly named as a single entity under EC 2.5.1.77.

CofG
Identifiers
SymbolCofG
InterPro IPR019939
CofH
Identifiers
SymbolCofH
InterPro IPR019940

All members of these enzymes belong to a single clade of the CofH (2.5.1.147) and CofG (4.3.1.32) families, sharing a TIM barrel structure. The two EC numbers represent discrete steps in this reaction. Some enzyme complexes have CofG and CofH (subunits 1 and 2) in different chains assembled into a heterodimer, while others like the bifunctional fbiC has the two domains on one single chain.

References

  1. ^ Graham DE, Xu H, White RH (December 2003). "Identification of the 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase required for coenzyme F(420) biosynthesis". Archives of Microbiology. 180 (6): 455–64. doi: 10.1007/s00203-003-0614-8. PMID  14593448.
  2. ^ Choi KP, Kendrick N, Daniels L (May 2002). "Demonstration that fbiC is required by Mycobacterium bovis BCG for coenzyme F(420) and FO biosynthesis". Journal of Bacteriology. 184 (9): 2420–8. doi: 10.1128/JB.184.9.2420-2428.2002. PMC  134996. PMID  11948155.

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