Genus-level cladogram of the Echimyini rodents, based on mitochondrial and nuclear DNA sequences. [1] [2] [3] [4] [5] [6] [7] [8] [9]
The informal clade name "Dactylomines" is indicated to reflect the shared unique features of the bamboo rats Dactylomys, Olallamys, and Kannabateomys. [10]
The informal name "Eumysopines" is provided to show that Lonchothrix and Mesomys have often been classified in this otherwise polyphyletic subfamily. [10]
The root of the cladogram is also indicated: it can be seen as the most recent common ancestor of all taxa of the phylogenetic tree.
Usage
{{Cladogram of Echimyini genera}}
yields:
See also
- Template:Cladogram of Echimyidae and Capromyidae genera
- Template:Cladogram of Euryzygomatomyinae + Carterodon + Capromyidae genera
- Template:Cladogram of Myocastorini genera
- Template:Cladogram of Proechimys species
References
- ^ Lara, Márcia C.; Patton, James L.; da Silva, Maria Nazareth F. (1996). "The Simultaneous Diversification of South American Echimyid Rodents (Hystricognathi) Based on Complete Cytochrome b Sequences". Molecular Phylogenetics and Evolution. 5 (2): 403–413. doi: 10.1006/mpev.1996.0035.
- ^ Leite, Yuri L. R.; Patton, James L. (2002). "Evolution of South American spiny rats (Rodentia, Echimyidae): the star-phylogeny hypothesis revisited". Molecular Phylogenetics and Evolution. 25 (3): 455–464. doi: 10.1016/s1055-7903(02)00279-8.
- ^ Galewski, Thomas; Mauffrey, Jean-François; Leite, Yuri L. R.; Patton, James L.; Douzery, Emmanuel J. P. (2005). "Ecomorphological diversification among South American spiny rats (Rodentia; Echimyidae): a phylogenetic and chronological approach". Molecular Phylogenetics and Evolution. 34 (3): 601–615. doi: 10.1016/j.ympev.2004.11.015.
- ^ Upham, Nathan S.; Patterson, Bruce D. (2012). "Diversification and biogeography of the Neotropical caviomorph lineage Octodontoidea (Rodentia: Hystricognathi)". Molecular Phylogenetics and Evolution. 63 (2): 417–429. doi: 10.1016/j.ympev.2012.01.020.
- ^ Fabre, Pierre-Henri; Galewski, Thomas; Tilak, Marie-ka; Douzery, Emmanuel J. P. (2013-03-01). "Diversification of South American spiny rats (Echimyidae): a multigene phylogenetic approach". Zoologica Scripta. 42 (2): 117–134. doi: 10.1111/j.1463-6409.2012.00572.x. ISSN 1463-6409.
- ^ Loss, Ana; Moura, Raquel T.; Leite, Yuri L. R. (2014). "Unexpected phylogenetic relationships of the painted tree rat Callistomys pictus (Rodentia: Echimyidae)" (PDF). Natureza on line. 12: 132–136.
- ^ Fabre, Pierre-Henri; Vilstrup, Julia T.; Raghavan, Maanasa; Der Sarkissian, Clio; Willerslev, Eske; Douzery, Emmanuel J. P.; Orlando, Ludovic (2014-07-01). "Rodents of the Caribbean: origin and diversification of hutias unravelled by next-generation museomics". Biology Letters. 10 (7): 20140266. doi: 10.1098/rsbl.2014.0266. ISSN 1744-9561.
- ^ Upham, Nathan S.; Patterson, Bruce D. (2015). "Evolution of Caviomorph rodents: a complete phylogeny and timetree for living genera". In Vassallo, Aldo Ivan; Antenucci, Daniel (eds.). Biology of caviomorph rodents: diversity and evolution. Buenos Aires: SAREM Series A, Mammalogical Research — Sociedad Argentina para el Estudio de los Mamíferos. pp. 63–120.
- ^ Fabre, Pierre-Henri; Upham, Nathan S.; Emmons, Louise H.; Justy, Fabienne; Leite, Yuri L. R.; Loss, Ana Carolina; Orlando, Ludovic; Tilak, Marie-Ka; Patterson, Bruce D.; Douzery, Emmanuel J. P. (2017-03-01). "Mitogenomic Phylogeny, Diversification, and Biogeography of South American Spiny Rats". Molecular Biology and Evolution. 34 (3): 613–633. doi: 10.1093/molbev/msw261. ISSN 0737-4038.
- ^ a b Fabre, Pierre-Henri; Patton, James L.; Leite, Yuri L. R. (2016). "Family Echimyidae (hutias, South American spiny-rats and coypu)". In Wilson, Don E.; Lacher, Thomas E. Jr; Mittermeier, Russell A. (eds.). Handbook of the Mammals of the World. Vol 6. Lagomorphs and Rodents I. Barcelona: Lynx Edicions. pp. 552–641. ISBN 978-84-941892-3-4.
Genus-level cladogram of the Echimyini rodents, based on mitochondrial and nuclear DNA sequences. [1] [2] [3] [4] [5] [6] [7] [8] [9]
The informal clade name "Dactylomines" is indicated to reflect the shared unique features of the bamboo rats Dactylomys, Olallamys, and Kannabateomys. [10]
The informal name "Eumysopines" is provided to show that Lonchothrix and Mesomys have often been classified in this otherwise polyphyletic subfamily. [10]
The root of the cladogram is also indicated: it can be seen as the most recent common ancestor of all taxa of the phylogenetic tree.
Usage
{{Cladogram of Echimyini genera}}
yields:
See also
- Template:Cladogram of Echimyidae and Capromyidae genera
- Template:Cladogram of Euryzygomatomyinae + Carterodon + Capromyidae genera
- Template:Cladogram of Myocastorini genera
- Template:Cladogram of Proechimys species
References
- ^ Lara, Márcia C.; Patton, James L.; da Silva, Maria Nazareth F. (1996). "The Simultaneous Diversification of South American Echimyid Rodents (Hystricognathi) Based on Complete Cytochrome b Sequences". Molecular Phylogenetics and Evolution. 5 (2): 403–413. doi: 10.1006/mpev.1996.0035.
- ^ Leite, Yuri L. R.; Patton, James L. (2002). "Evolution of South American spiny rats (Rodentia, Echimyidae): the star-phylogeny hypothesis revisited". Molecular Phylogenetics and Evolution. 25 (3): 455–464. doi: 10.1016/s1055-7903(02)00279-8.
- ^ Galewski, Thomas; Mauffrey, Jean-François; Leite, Yuri L. R.; Patton, James L.; Douzery, Emmanuel J. P. (2005). "Ecomorphological diversification among South American spiny rats (Rodentia; Echimyidae): a phylogenetic and chronological approach". Molecular Phylogenetics and Evolution. 34 (3): 601–615. doi: 10.1016/j.ympev.2004.11.015.
- ^ Upham, Nathan S.; Patterson, Bruce D. (2012). "Diversification and biogeography of the Neotropical caviomorph lineage Octodontoidea (Rodentia: Hystricognathi)". Molecular Phylogenetics and Evolution. 63 (2): 417–429. doi: 10.1016/j.ympev.2012.01.020.
- ^ Fabre, Pierre-Henri; Galewski, Thomas; Tilak, Marie-ka; Douzery, Emmanuel J. P. (2013-03-01). "Diversification of South American spiny rats (Echimyidae): a multigene phylogenetic approach". Zoologica Scripta. 42 (2): 117–134. doi: 10.1111/j.1463-6409.2012.00572.x. ISSN 1463-6409.
- ^ Loss, Ana; Moura, Raquel T.; Leite, Yuri L. R. (2014). "Unexpected phylogenetic relationships of the painted tree rat Callistomys pictus (Rodentia: Echimyidae)" (PDF). Natureza on line. 12: 132–136.
- ^ Fabre, Pierre-Henri; Vilstrup, Julia T.; Raghavan, Maanasa; Der Sarkissian, Clio; Willerslev, Eske; Douzery, Emmanuel J. P.; Orlando, Ludovic (2014-07-01). "Rodents of the Caribbean: origin and diversification of hutias unravelled by next-generation museomics". Biology Letters. 10 (7): 20140266. doi: 10.1098/rsbl.2014.0266. ISSN 1744-9561.
- ^ Upham, Nathan S.; Patterson, Bruce D. (2015). "Evolution of Caviomorph rodents: a complete phylogeny and timetree for living genera". In Vassallo, Aldo Ivan; Antenucci, Daniel (eds.). Biology of caviomorph rodents: diversity and evolution. Buenos Aires: SAREM Series A, Mammalogical Research — Sociedad Argentina para el Estudio de los Mamíferos. pp. 63–120.
- ^ Fabre, Pierre-Henri; Upham, Nathan S.; Emmons, Louise H.; Justy, Fabienne; Leite, Yuri L. R.; Loss, Ana Carolina; Orlando, Ludovic; Tilak, Marie-Ka; Patterson, Bruce D.; Douzery, Emmanuel J. P. (2017-03-01). "Mitogenomic Phylogeny, Diversification, and Biogeography of South American Spiny Rats". Molecular Biology and Evolution. 34 (3): 613–633. doi: 10.1093/molbev/msw261. ISSN 0737-4038.
- ^ a b Fabre, Pierre-Henri; Patton, James L.; Leite, Yuri L. R. (2016). "Family Echimyidae (hutias, South American spiny-rats and coypu)". In Wilson, Don E.; Lacher, Thomas E. Jr; Mittermeier, Russell A. (eds.). Handbook of the Mammals of the World. Vol 6. Lagomorphs and Rodents I. Barcelona: Lynx Edicions. pp. 552–641. ISBN 978-84-941892-3-4.