Genus-level cladogram of the Echimyidae and Capromyidae rodents, based on mitochondrial and nuclear DNA sequences. [1] [2] [3] [4] [5] [6] [7] [8] [9] [10]
The arboreal taxa Echimys, Phyllomys, Makalata, Pattonomys, Toromys, Dactylomys, Olallamys, Kannabateomys, Diplomys, Santamartamys, Lonchothrix, Mesomys and Isothrix form the Echimyini clade. However, these 13 arboreal genera together with Callistomys constitute a polyphyletic assemblage (green bar).
The fossorial taxa Euryzygomatomys, Clyomys, and Carterodon constitute a polyphyletic assemblage (red bar).
The root of the cladogram is also indicated: it can be seen as the most recent common ancestor of all taxa of the phylogenetic tree.
Usage
Cladogram for use in the Echimyidae and Capromyidae articles, and in the articles for each of their subtaxa (subfamilies, tribes, and genera).
{{Cladogram of Echimyidae and Capromyidae genera}}
yields:
See also
- Template:Cladogram of Euryzygomatomyinae + Carterodon + Capromyidae genera
- Template:Cladogram of Myocastorini genera
- Template:Cladogram of Echimyini genera
- Template:Cladogram of Proechimys species
References
- ^ Lara, Márcia C.; Patton, James L.; da Silva, Maria Nazareth F. (1996). "The Simultaneous Diversification of South American Echimyid Rodents (Hystricognathi) Based on Complete Cytochrome b Sequences". Molecular Phylogenetics and Evolution. 5 (2): 403–413. doi: 10.1006/mpev.1996.0035.
- ^ Leite, Yuri L. R.; Patton, James L. (2002). "Evolution of South American spiny rats (Rodentia, Echimyidae): the star-phylogeny hypothesis revisited". Molecular Phylogenetics and Evolution. 25 (3): 455–464. doi: 10.1016/s1055-7903(02)00279-8.
- ^ Galewski, Thomas; Mauffrey, Jean-François; Leite, Yuri L. R.; Patton, James L.; Douzery, Emmanuel J. P. (2005). "Ecomorphological diversification among South American spiny rats (Rodentia; Echimyidae): a phylogenetic and chronological approach". Molecular Phylogenetics and Evolution. 34 (3): 601–615. doi: 10.1016/j.ympev.2004.11.015.
- ^ Upham, Nathan S.; Patterson, Bruce D. (2012). "Diversification and biogeography of the Neotropical caviomorph lineage Octodontoidea (Rodentia: Hystricognathi)". Molecular Phylogenetics and Evolution. 63 (2): 417–429. doi: 10.1016/j.ympev.2012.01.020.
- ^ Fabre, Pierre-Henri; Galewski, Thomas; Tilak, Marie-ka; Douzery, Emmanuel J. P. (2013-03-01). "Diversification of South American spiny rats (Echimyidae): a multigene phylogenetic approach". Zoologica Scripta. 42 (2): 117–134. doi: 10.1111/j.1463-6409.2012.00572.x. ISSN 1463-6409.
- ^ Fabre, Pierre-Henri; Vilstrup, Julia T.; Raghavan, Maanasa; Der Sarkissian, Clio; Willerslev, Eske; Douzery, Emmanuel J. P.; Orlando, Ludovic (2014-07-01). "Rodents of the Caribbean: origin and diversification of hutias unravelled by next-generation museomics". Biology Letters. 10 (7): 20140266. doi: 10.1098/rsbl.2014.0266. ISSN 1744-9561.
- ^ Loss, Ana; Moura, Raquel T.; Leite, Yuri L. R. (2014). "Unexpected phylogenetic relationships of the painted tree rat Callistomys pictus (Rodentia: Echimyidae)" (PDF). Natureza on line. 12: 132–136.
- ^ Upham, Nathan S.; Patterson, Bruce D. (2015). "Evolution of Caviomorph rodents: a complete phylogeny and timetree for living genera". In Vassallo, Aldo Ivan; Antenucci, Daniel (eds.). Biology of caviomorph rodents: diversity and evolution. Buenos Aires: SAREM Series A, Mammalogical Research — Sociedad Argentina para el Estudio de los Mamíferos. pp. 63–120.
- ^ Fabre, Pierre-Henri; Patton, James L.; Leite, Yuri L. R. (2016). "Family Echimyidae (hutias, South American spiny-rats and coypu)". In Wilson, Don E.; Lacher, Thomas E. Jr; Mittermeier, Russell A. (eds.). Handbook of the Mammals of the World. Vol 6. Lagomorphs and Rodents I. Barcelona: Lynx Edicions. pp. 552–641. ISBN 978-84-941892-3-4.
- ^ Fabre, Pierre-Henri; Upham, Nathan S.; Emmons, Louise H.; Justy, Fabienne; Leite, Yuri L. R.; Loss, Ana Carolina; Orlando, Ludovic; Tilak, Marie-Ka; Patterson, Bruce D.; Douzery, Emmanuel J. P. (2017-03-01). "Mitogenomic Phylogeny, Diversification, and Biogeography of South American Spiny Rats". Molecular Biology and Evolution. 34 (3): 613–633. doi: 10.1093/molbev/msw261. ISSN 0737-4038.
Genus-level cladogram of the Echimyidae and Capromyidae rodents, based on mitochondrial and nuclear DNA sequences. [1] [2] [3] [4] [5] [6] [7] [8] [9] [10]
The arboreal taxa Echimys, Phyllomys, Makalata, Pattonomys, Toromys, Dactylomys, Olallamys, Kannabateomys, Diplomys, Santamartamys, Lonchothrix, Mesomys and Isothrix form the Echimyini clade. However, these 13 arboreal genera together with Callistomys constitute a polyphyletic assemblage (green bar).
The fossorial taxa Euryzygomatomys, Clyomys, and Carterodon constitute a polyphyletic assemblage (red bar).
The root of the cladogram is also indicated: it can be seen as the most recent common ancestor of all taxa of the phylogenetic tree.
Usage
Cladogram for use in the Echimyidae and Capromyidae articles, and in the articles for each of their subtaxa (subfamilies, tribes, and genera).
{{Cladogram of Echimyidae and Capromyidae genera}}
yields:
See also
- Template:Cladogram of Euryzygomatomyinae + Carterodon + Capromyidae genera
- Template:Cladogram of Myocastorini genera
- Template:Cladogram of Echimyini genera
- Template:Cladogram of Proechimys species
References
- ^ Lara, Márcia C.; Patton, James L.; da Silva, Maria Nazareth F. (1996). "The Simultaneous Diversification of South American Echimyid Rodents (Hystricognathi) Based on Complete Cytochrome b Sequences". Molecular Phylogenetics and Evolution. 5 (2): 403–413. doi: 10.1006/mpev.1996.0035.
- ^ Leite, Yuri L. R.; Patton, James L. (2002). "Evolution of South American spiny rats (Rodentia, Echimyidae): the star-phylogeny hypothesis revisited". Molecular Phylogenetics and Evolution. 25 (3): 455–464. doi: 10.1016/s1055-7903(02)00279-8.
- ^ Galewski, Thomas; Mauffrey, Jean-François; Leite, Yuri L. R.; Patton, James L.; Douzery, Emmanuel J. P. (2005). "Ecomorphological diversification among South American spiny rats (Rodentia; Echimyidae): a phylogenetic and chronological approach". Molecular Phylogenetics and Evolution. 34 (3): 601–615. doi: 10.1016/j.ympev.2004.11.015.
- ^ Upham, Nathan S.; Patterson, Bruce D. (2012). "Diversification and biogeography of the Neotropical caviomorph lineage Octodontoidea (Rodentia: Hystricognathi)". Molecular Phylogenetics and Evolution. 63 (2): 417–429. doi: 10.1016/j.ympev.2012.01.020.
- ^ Fabre, Pierre-Henri; Galewski, Thomas; Tilak, Marie-ka; Douzery, Emmanuel J. P. (2013-03-01). "Diversification of South American spiny rats (Echimyidae): a multigene phylogenetic approach". Zoologica Scripta. 42 (2): 117–134. doi: 10.1111/j.1463-6409.2012.00572.x. ISSN 1463-6409.
- ^ Fabre, Pierre-Henri; Vilstrup, Julia T.; Raghavan, Maanasa; Der Sarkissian, Clio; Willerslev, Eske; Douzery, Emmanuel J. P.; Orlando, Ludovic (2014-07-01). "Rodents of the Caribbean: origin and diversification of hutias unravelled by next-generation museomics". Biology Letters. 10 (7): 20140266. doi: 10.1098/rsbl.2014.0266. ISSN 1744-9561.
- ^ Loss, Ana; Moura, Raquel T.; Leite, Yuri L. R. (2014). "Unexpected phylogenetic relationships of the painted tree rat Callistomys pictus (Rodentia: Echimyidae)" (PDF). Natureza on line. 12: 132–136.
- ^ Upham, Nathan S.; Patterson, Bruce D. (2015). "Evolution of Caviomorph rodents: a complete phylogeny and timetree for living genera". In Vassallo, Aldo Ivan; Antenucci, Daniel (eds.). Biology of caviomorph rodents: diversity and evolution. Buenos Aires: SAREM Series A, Mammalogical Research — Sociedad Argentina para el Estudio de los Mamíferos. pp. 63–120.
- ^ Fabre, Pierre-Henri; Patton, James L.; Leite, Yuri L. R. (2016). "Family Echimyidae (hutias, South American spiny-rats and coypu)". In Wilson, Don E.; Lacher, Thomas E. Jr; Mittermeier, Russell A. (eds.). Handbook of the Mammals of the World. Vol 6. Lagomorphs and Rodents I. Barcelona: Lynx Edicions. pp. 552–641. ISBN 978-84-941892-3-4.
- ^ Fabre, Pierre-Henri; Upham, Nathan S.; Emmons, Louise H.; Justy, Fabienne; Leite, Yuri L. R.; Loss, Ana Carolina; Orlando, Ludovic; Tilak, Marie-Ka; Patterson, Bruce D.; Douzery, Emmanuel J. P. (2017-03-01). "Mitogenomic Phylogeny, Diversification, and Biogeography of South American Spiny Rats". Molecular Biology and Evolution. 34 (3): 613–633. doi: 10.1093/molbev/msw261. ISSN 0737-4038.