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Genus of bacteria
Rubinisphaera
Scientific classification
Domain:
Phylum:
Class:
Order:
Family:
Genus:
Rubinisphaera
Type species
Rubinisphaera brasiliensis (Schlesner 1990) Scheuner et al. 2015
Species
R. brasiliensis
R. italica
R. margarita
Rubinisphaera is a genus of bacteria from the family of
Planctomycetaceae with two known species.
[1]
[2] Rubinisphaera brasiliensis has been isolated from water from the
Lagoa Vermelha from
Brazil .
[3]
[4]
Phylogeny
The currently accepted taxonomy is based on the
List of Prokaryotic names with Standing in Nomenclature (LPSN)
[5] and
National Center for Biotechnology Information (NCBI)
[6]
16S rRNA based
LTP _08_2023
[7]
[8]
[9]
120 marker proteins based
GTDB 08-RS214
[10]
[11]
[12]
Rubinisphaera
R. margarita
R. brasiliensis
R. italica
Rubinisphaera
R. brasiliensis (Schlesner 1990) Scheuner et al. 2015
R. italica Kallscheuer et al. 2021
R. margarita Vitorino et al. 2022
See also
References
^
a
b Parte, A.C.
"Rubinisphaera" .
LPSN .
^
"Rubinisphaera" . www.uniprot.org .
^
"Details: DSM-5305" . www.dsmz.de .
^ Scheuner, C; Tindall, BJ; Lu, M; Nolan, M; Lapidus, A; Cheng, JF; Goodwin, L; Pitluck, S; Huntemann, M; Liolios, K; Pagani, I; Mavromatis, K; Ivanova, N; Pati, A; Chen, A; Palaniappan, K; Jeffries, CD; Hauser, L; Land, M; Mwirichia, R; Rohde, M; Abt, B; Detter, JC; Woyke, T; Eisen, JA; Markowitz, V; Hugenholtz, P; Göker, M; Kyrpides, NC; Klenk, HP (2014).
"Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305(T)), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended descriptions of the order Planctomycetales and the family Planctomycetaceae" . Standards in Genomic Sciences . 9 : 10.
doi :
10.1186/1944-3277-9-10 .
PMC
4334474 .
PMID
25780503 .
^ A.C. Parte; et al.
"Rubinisphaera" .
List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2022-09-09 .
^ Sayers; et al.
"Rubinisphaera" .
National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2022-09-09 .
^
"The LTP" . Retrieved 20 November 2023 .
^
"LTP_all tree in newick format" . Retrieved 20 November 2023 .
^
"LTP_08_2023 Release Notes" (PDF) . Retrieved 20 November 2023 .
^
"GTDB release 08-RS214" .
Genome Taxonomy Database . Retrieved 10 May 2023 .
^
"bac120_r214.sp_label" .
Genome Taxonomy Database . Retrieved 10 May 2023 .
^
"Taxon History" .
Genome Taxonomy Database . Retrieved 10 May 2023 .
Terrabacteria
BV1, BV3, BV5
others Cyanoprokaryota
Cyanobacteriota
"
Margulisiibacteriota "
"Marinamargulisbacteria"
"Riflemargulisbacteria"
"Saganbacteria"
"Termititenacia"
Firmicutes
BV3 Low GC
Bacillota
Bacillota A
"
Clostridiia "
"Thermoanaerobacteria"
"Thermosediminibacteria"
Bacillota D
Bacillota E
"Sulfobacillia"
"Symbiobacteriia"
"Thermaerobacteria"
Bacillota G
"Hydrogenisporia"
Limnochordia
"
Desulfotomaculota "
"Carboxydocellia"
"Carboxydothermia"
"Dehalobacteriia"
"Desulfitobacteriia"
"Desulfotomaculia"
"Moorellia"
"Peptococcia"
"Syntrophomonadia"
"Thermincolia"
"Halanaerobiaeota"
"Selenobacteria"
CPR group Thermotogida
Fusobacterida
Hydrobacteria
BV2, BV4
others