From Wikipedia, the free encyclopedia
RTL3
Identifiers
Aliases RTL3, Mar3, Mart3, ZHC5, ZCCHC5, zinc finger CCHC-type containing 5, SIRH9, retrotransposon Gag like 3
External IDs MGI: 2685221; HomoloGene: 19397; GeneCards: RTL3; OMA: RTL3 - orthologs
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_152694

NM_199468

RefSeq (protein)

NP_689907

NP_955762

Location (UCSC) Chr X: 78.66 – 78.66 Mb Chr X: 105.88 – 105.88 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Retrotransposon Gag like 3 is a protein that in humans is encoded by the RTL3 gene. [5]

Function

This gene is a member of a family of gag-related retrotransposon genes. These genes appear to have lost the ability to retrotranspose; however, their open reading frames have remained intact, which may indicate that these genes have acquired new functions in the cell. Retrotransposon gag-like-3 (RTL3/ZCCHC5/MART3) is one of eleven Sushi-like neogenes identified in the human genome7 RTL3 encodes a 53 kDa protein with a nucleic acid-binding domain (CX2CX4HX4C), gag-like region within the open reading frame and an ssDNA/RNA-binding homeobox-associated leucine zipper motif. [6] It has been reported that RTL3 and SOX-9 co-regulate the expression of COL2A1 in chondrocytes. [6]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000179300Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000047686Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ "Entrez Gene: Retrotransposon Gag like 3". Retrieved 2017-09-18.
  6. ^ a b Ball HC, Ansari MY, Ahmad N, Novak K, Haqqi TM (November 2021). "A retrotransposon gag-like-3 gene RTL3 and SOX-9 co-regulate the expression of COL2A1 in chondrocytes". Connective Tissue Research. 62 (6): 615–628. doi: 10.1080/03008207.2020.1828380. PMC  8404968. PMID  33043724.

This article incorporates text from the United States National Library of Medicine, which is in the public domain.


From Wikipedia, the free encyclopedia
RTL3
Identifiers
Aliases RTL3, Mar3, Mart3, ZHC5, ZCCHC5, zinc finger CCHC-type containing 5, SIRH9, retrotransposon Gag like 3
External IDs MGI: 2685221; HomoloGene: 19397; GeneCards: RTL3; OMA: RTL3 - orthologs
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_152694

NM_199468

RefSeq (protein)

NP_689907

NP_955762

Location (UCSC) Chr X: 78.66 – 78.66 Mb Chr X: 105.88 – 105.88 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Retrotransposon Gag like 3 is a protein that in humans is encoded by the RTL3 gene. [5]

Function

This gene is a member of a family of gag-related retrotransposon genes. These genes appear to have lost the ability to retrotranspose; however, their open reading frames have remained intact, which may indicate that these genes have acquired new functions in the cell. Retrotransposon gag-like-3 (RTL3/ZCCHC5/MART3) is one of eleven Sushi-like neogenes identified in the human genome7 RTL3 encodes a 53 kDa protein with a nucleic acid-binding domain (CX2CX4HX4C), gag-like region within the open reading frame and an ssDNA/RNA-binding homeobox-associated leucine zipper motif. [6] It has been reported that RTL3 and SOX-9 co-regulate the expression of COL2A1 in chondrocytes. [6]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000179300Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000047686Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ "Entrez Gene: Retrotransposon Gag like 3". Retrieved 2017-09-18.
  6. ^ a b Ball HC, Ansari MY, Ahmad N, Novak K, Haqqi TM (November 2021). "A retrotransposon gag-like-3 gene RTL3 and SOX-9 co-regulate the expression of COL2A1 in chondrocytes". Connective Tissue Research. 62 (6): 615–628. doi: 10.1080/03008207.2020.1828380. PMC  8404968. PMID  33043724.

This article incorporates text from the United States National Library of Medicine, which is in the public domain.



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