| Psychromonas antarctica | |
|---|---|
| Scientific classification | |
| Domain: | |
| Phylum: | |
| Class: | |
| Order: | |
| Family: | |
| Genus: | |
| Binomial name | |
| Psychromonas antarctica corrig. Mountfort et al. 1998
| |
Psychromonas antarctica is a species of Pseudomonadota. [1] [2] The halophilic and psychrophile bacterium was first isolated from a salinity pond in Antarctica. Psychromonas antarctica is anaerobic but tolerates the presence of oxygen (aerotolerant). It is motile with a polar flagellum.
Genomic Sequence
It was reported that a draft of the full genome sequence had been completed, in April 2022. [3] The report states that the sequencing was performed on DNA extracted from Psychromonas antarctica strain DSM 10704. 300 contigs were assembled, with a total length of 3,916,717 bp ( base pairs), and 95x coverage. The GenBank master record can be found here, and the sequence read archive can be found here.
References
- ^ Ivanova EP, Flavier S, Christen R. (2004). "Phylogenetic relationships among marine Alteromonas-like proteobacteria: Emended description of the family Alteromonadaceae and proposal of Pseudoalteromonadaceae fam. nov., Colwelliaceae fam. nov., Shewanellaceae fam. nov., Moritellaceae fam. nov., Ferrimonadaceae fam. nov., Idiomarinaceae fam. nov. and Psychromonadaceae fam. nov.". Int. J. Syst. Evol. Microbiol. 54 (Pt 5): 1773–1788. doi: 10.1099/ijs.0.02997-0. PMID 15388743.
- ^ Mountfort DO, Rainey FA, Burghardt J, Kaspar HF, Stackebrandt E. (1998). "Psychromonas antarctica gen. nov., sp. nov., a new aerotolerant anaerobic, halophilic psychrophile isolated from pond sediment of the McMurdo Ice Shelf, Antarctica". Archives of Microbiology. 169 (3): 231–238. Bibcode: 1998ArMic.169..231M. doi: 10.1007/s002030050566. PMID 9477258. S2CID 26885982.
- ^ Chandaluri, Shanmukh; Thomas, Jonathan C. (2022-04-25). Stewart, Frank J. (ed.). "Whole-Genome Sequence of Psychromonas antarctica Strain DSM 10704". Microbiology Resource Announcements. 11 (5): e00141–22. doi: 10.1128/mra.00141-22. ISSN 2576-098X. PMC 9119096. PMID 35467384.
External links
- J.P. Euzéby: List of Prokaryotic names with Standing in Nomenclature - Genus Psychromonas
- Type strain of Psychromonas antarctica at BacDive - the Bacterial Diversity Metadatabase
 | This Alteromonadales article is a stub. You can help Wikipedia by expanding it. |
| Psychromonas antarctica | |
|---|---|
| Scientific classification | |
| Domain: | |
| Phylum: | |
| Class: | |
| Order: | |
| Family: | |
| Genus: | |
| Binomial name | |
| Psychromonas antarctica corrig. Mountfort et al. 1998
| |
Psychromonas antarctica is a species of Pseudomonadota. [1] [2] The halophilic and psychrophile bacterium was first isolated from a salinity pond in Antarctica. Psychromonas antarctica is anaerobic but tolerates the presence of oxygen (aerotolerant). It is motile with a polar flagellum.
Genomic Sequence
It was reported that a draft of the full genome sequence had been completed, in April 2022. [3] The report states that the sequencing was performed on DNA extracted from Psychromonas antarctica strain DSM 10704. 300 contigs were assembled, with a total length of 3,916,717 bp ( base pairs), and 95x coverage. The GenBank master record can be found here, and the sequence read archive can be found here.
References
- ^ Ivanova EP, Flavier S, Christen R. (2004). "Phylogenetic relationships among marine Alteromonas-like proteobacteria: Emended description of the family Alteromonadaceae and proposal of Pseudoalteromonadaceae fam. nov., Colwelliaceae fam. nov., Shewanellaceae fam. nov., Moritellaceae fam. nov., Ferrimonadaceae fam. nov., Idiomarinaceae fam. nov. and Psychromonadaceae fam. nov.". Int. J. Syst. Evol. Microbiol. 54 (Pt 5): 1773–1788. doi: 10.1099/ijs.0.02997-0. PMID 15388743.
- ^ Mountfort DO, Rainey FA, Burghardt J, Kaspar HF, Stackebrandt E. (1998). "Psychromonas antarctica gen. nov., sp. nov., a new aerotolerant anaerobic, halophilic psychrophile isolated from pond sediment of the McMurdo Ice Shelf, Antarctica". Archives of Microbiology. 169 (3): 231–238. Bibcode: 1998ArMic.169..231M. doi: 10.1007/s002030050566. PMID 9477258. S2CID 26885982.
- ^ Chandaluri, Shanmukh; Thomas, Jonathan C. (2022-04-25). Stewart, Frank J. (ed.). "Whole-Genome Sequence of Psychromonas antarctica Strain DSM 10704". Microbiology Resource Announcements. 11 (5): e00141–22. doi: 10.1128/mra.00141-22. ISSN 2576-098X. PMC 9119096. PMID 35467384.
External links
- J.P. Euzéby: List of Prokaryotic names with Standing in Nomenclature - Genus Psychromonas
- Type strain of Psychromonas antarctica at BacDive - the Bacterial Diversity Metadatabase
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| This Alteromonadales article is a stub. You can help Wikipedia by expanding it. |