Legend of nucleobases | |
---|---|
Code | Nucleotide represented |
A | Adenine (A) |
C | Cytosine (C) |
G | Guanine (G) |
T | Thymine (T) |
N | A, C, G or T |
M | A or C |
R | A or G |
W | A or T |
Y | C or T |
S | C or G |
K | G or T |
H | A, C or T |
B | C, G or T |
V | A, C or G |
D | A, G or T |
This article contains a list of the most studied restriction enzymes whose names start with G to K inclusive. It contains approximately 90 enzymes.
The following information is given:
as in this not listed enzyme: | EcoR70I |
Enzyme | PDB code | Source | Recognition sequence | Cut | Isoschizomers |
GalI | Gluconobacter albidus | 5' CCGCGG 3' GGCGCC
|
5' ---CCGC GG--- 3' 3' ---GG CGCC--- 5'
|
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GceI | Gluconobacter cerinus | 5' CCGCGG 3' GGCGCC
|
5' ---CCGC GG--- 3' 3' ---GG CGCC--- 5'
|
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GceGLI | Gluconobacter cerinus | 5' CCGCGG 3' GGCGCC
|
5' ---CCGC GG--- 3' 3' ---GG CGCC--- 5'
|
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GdiI | Gluconobacter dioxyacetonicus | 5' AGGCCT 3' TCCGGA
|
5' ---AGG CCT--- 3' 3' ---TCC GGA--- 5'
|
AatI, AspMI, Eco147I, PceI, SarI, Sru30DI, SseBI, SteI, StuI | |
GdiII | Gluconobacter dioxyacetonicus | 5' CGGCCR 3' GCCGGY
|
5' ---C GGCCR--- 3' 3' ---GCCGG Y--- 5'
|
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GstI | Geobacillus stearothermophilus | 5' GGATCC 3' CCTAGG
|
5' ---G GATCC--- 3' 3' ---CCTAG G--- 5'
|
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GsuI | Gluconobacter suboxydans H-15T | 5' CTGGAG 3' GACCTC
|
5' ---CTGGAGN12NNNN --- 3' 3' ---GACCTCN12NN NN--- 5'
|
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Enzyme | PDB code | Source | Recognition sequence | Cut | Isoschizomers | ||||||
HacI | Halococcus acetoinfaciens | 5' GATC 3' CTAG
|
5' --- GATC--- 3' 3' ---CTAG --- 5'
|
Bme12I, Bsp67I, BstENII, CcyI, FnuEI, MgoI, NphI, Sau3AI | |||||||
HaeI | Haemophilus aegyptius | 5' WGGCCW 3' WCCGGW
|
5' ---WGG CCW--- 3' 3' ---WCC GGW--- 5'
|
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HaeII | Haemophilus aegypticus | 5' RGCGCY 3' YCGCGR
|
5' ---RGCGC Y--- 3' 3' ---Y CGCGR--- 5'
|
| |||||||
HaeIII | Haemophilus aegypticus | 5' GGCC 3' CCGG
|
5' ---GG CC--- 3' 3' ---CC GG--- 5'
|
BsuRI | |||||||
HaeIV | Haemophilus aegyptius | 5' GAYN5RTC 3' CTRN5YAG
|
5' ---GAYN5RTCN8NNNNNN --- 3' 3' ---CTRN5YAGN8N NNNNN--- 5'
|
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HalI | Hafnia alvei B6 | 5' GAATTC 3' CTTAAG
|
5' ---G AATTC--- 3' 3' ---CTTAA G--- 5'
|
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HalII | Hafnia alvei B6 | 5' CTGCAG 3' GACGTC
|
5' ---CTGCA G--- 3' 3' ---G ACGTC--- 5'
|
AjoI, AliAJI, Bsp63I, CfrA4I, CfuII, CstI, PstI, SflI, Srl5DI, Sst12I | |||||||
HapII | Haemophilus aphrophilus | 5' CCGG 3' GGCC
|
5' ---C CGG--- 3' 3' ---GGC C--- 5'
|
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HgaI [7] | Haemophilus gallinarum | 5' GACGC 3' CTGCG
|
5' ---GACGCN4N NNNNN--- 3' 3' ---CTGCGN4NNNNNN --- 5'
|
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HgiI | Herpetosiphon giganteus 3303 | 5' GRCGYC 3' CYGCRG
|
5' ---GR CGYC--- 3' 3' ---CYGC RG--- 5'
|
AcyI, AsuIII, BbiII, BstACI, HgiGI, HgiHII, Hin1I, PamII | |||||||
HgiAI | Herpetosiphon giganteus HP1023 | 5' GWGCWC 3' CWCGWG
|
5' ---GWGCW C--- 3' 3' ---C WCGWG--- 5'
|
| |||||||
HgiBI | Herpetosiphon giganteus Hpg5 | 5' GGWCC 3' CCWGG
|
5' ---G GWCC--- 3' 3' ---CCWG G--- 5'
|
Bme18I, BthAI, DsaIV, ErpI, FspMSI, HgiEI, Psp03I, VpaK11AI | |||||||
HgiCI | Herpetosiphon giganteus Hpg9 | 5' GGYRCC 3' CCRYGG
|
5' ---G GYRCC--- 3' 3' ---CCRYG G--- 5'
|
AccB1I, BanI, BspT107I, BshNI, Eco64I, HgiHI, MspB4I, PfaAI | |||||||
HgiCII | Herpetosiphon giganteus Hpg9 | 5' GGWCC 3' CCWGG
|
5' ---G GWCC--- 3' 3' ---CCWG G--- 5'
|
Bme18I, BthAI, DsaIV, FspMSI, HgiHIII, Psp03I, VpaK11AI | |||||||
HgiCIII | Herpetosiphon giganteus Hpg9 | 5' GTCGAC 3' CAGCTG
|
5' ---G TCGAC--- 3' 3' ---CAGCT G--- 5'
|
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HgiDI | Herpetosiphon giganteus Hpa2 | 5' GRCGYC 3' CYGCRG
|
5' ---GR CGYC--- 3' 3' ---CYGC RG--- 5'
|
AcyI, AsuIII, BbiII, BstACI, HgiGI, HgiI, Hin1I, PamII | |||||||
HgiDII | Herpetosiphon giganteus Hpa2 | 5' GTCGAC 3' CAGCTG
|
5' ---G TCGAC--- 3' 3' ---CAGCT G--- 5'
|
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HgiEI | Herpetosiphon giganteus Hpg24 | 5' GGWCC 3' CCWGG
|
5' ---G GWCC--- 3' 3' ---CCWG G--- 5'
|
Bme216I, BthAI, DsaIV, ErpI, FspMSI, HgiHIII, VpaK11AI | |||||||
HgiGI | Herpetosiphon giganteus Hpa1 | 5' GRCGYC 3' CYGCRG
|
5' ---GR CGYC--- 3' 3' ---CYGC RG--- 5'
|
AcyI, AosII, BbiII, BstACI, HgiI, HgiGI, Msp17I, PamII | |||||||
HgiHI | Herpetosiphon giganteus HP1049 | 5' GGYRCC 3' CCRYGG
|
5' ---G GYRCC--- 3' 3' ---CCRYG G--- 5'
|
AccB1I, BanI, BspT107I, BshNI, Eco64I, HgiCI, MspB4I, PfaAI | |||||||
HgiHII | Herpetosiphon giganteus HP1049 | 5' GRCGYC 3' CYGCRG
|
5' ---GR CGYC--- 3' 3' ---CYGC RG--- 5'
|
AosII, AsuIII, BsaHI, BstACI, HgiGI, HgiHII, Msp17I, PamII | |||||||
HgiHIII | Herpetosiphon giganteus HP1049 | 5' GGWCC 3' CCWGG
|
5' ---G GWCC--- 3' 3' ---CCWG G--- 5'
|
Bme216I, DsaIV, ErpI, HgiBI, Psp03I, VpaK11AI, VpaK11BI | |||||||
HgiJI | Herpetosiphon giganteus HFS101 | 5' GGWCC 3' CCWGG
|
5' ---G GWCC--- 3' 3' ---CCWG G--- 5'
|
Bme216I, CauI, DsaIV, FdiI, HgiBI, HgiHIII, Psp03I, VpaK11AI | |||||||
HgiJII | Herpetosiphon giganteus HFS101 | 5' GRGCYC 3' CYCGRG
|
5' ---GRGCY C--- 3' 3' ---C YCGRG--- 5'
|
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HgiS22I | Herpetosiphon giganteus | 5' CCSGG 3' GGSCC
|
5' ---CC SGG--- 3' 3' ---GGS CC--- 5'
|
AhaI, AseII, AsuC2I, BcnI, CauII, Eco1831I, EcoHI, Kpn49kII | |||||||
HhaI | Haemophilus haemolyticus | 5' GCGC 3' CGCG
|
5' ---GCG C--- 3' 3' ---C GCG--- 5'
|
AspLEI, BspLAI, BstHHI, CfoI, FnuDIII, Hin6I, HinP1I, SciNI | |||||||
HhaII | Haemophilus haemolyticus | 5' GANTC 3' CTNAG
|
5' ---G ANTC--- 3' 3' ---CTNA G--- 5'
|
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Hin1I | Haemophilus influenzae RFL1 | 5' GRCGYC 3' CYGCRG
|
5' ---GR CGYC--- 3' 3' ---CYGC RG--- 5'
|
AcyI, AhaII, AosII, AstWI, AsuIII, HgiI, HgiDI, HgiDI, Hsp92I | |||||||
Hin1II | Haemophilus influenzae RFL1 | 5' CATG 3' GTAC
|
5' ---CATG --- 3' 3' --- GTAC--- 5'
|
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Hin2I | Haemophilus influenzae RFL2 | 5' CCGG 3' GGCC
|
5' ---C CGG--- 3' 3' ---GGC C--- 5'
|
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Hin4I | Haemophilus influenzae RFL4 | 5' GAYN5VTC 3' CTRN5BAG
|
5' ---GAYN5VTCN7NNNNNN --- 3' 3' ---CTRN5BAGN7N NNNNN--- 5'
|
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Hin6I | Haemophilus influenzae RFL6 | 5' GCGC 3' CGCG
|
5' ---G CGC--- 3' 3' ---CGC G--- 5'
|
AspLEI, BspLAI, BstHHI, CfoI, FnuDIII, HhaI, HsoI, HspAI, SciNI | |||||||
HinJCI | Haemophilus influenzae JC9 | 5' GTYRAC 3' CARYTG
|
5' ---GTY RAC--- 3' 3' ---CAR YTG--- 5'
|
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HinP1I | 2FL3 Search PDBe | Haemophilus influenzae P1 | 5' GCGC 3' CGCG
|
5' ---G CGC--- 3' 3' ---CGC G--- 5'
|
BspLAI, BstHHI, CfoI, FnuDIII, HhaI, Hin6I, HsoI, HspAI, SciNI | ||||||
HincII | 2AUD Search PDBe | Haemophilus influenzae Rc | 5' GTYRAC 3' CARYTG
|
5' ---GTY RAC--- 3' 3' ---CAR YTG--- 5'
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HindII | Haemophilus influenzae Rd | 5' GTYRAC 3' CARYTG
|
5' ---GTY RAC--- 3' 3' ---CAR YTG--- 5'
|
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HindIII | 2E52, Search PDBe | Haemophilus influenzae Rd | 5' AAGCTT 3' TTCGAA
|
5' ---A AGCTT--- 3' 3' ---TTCGA A--- 5'
|
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HinfI | Haemophilus influenzae Rf | 5' GANTC 3' CTNAG
|
5' ---G ANTC--- 3' 3' ---CTNA G--- 5'
|
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HjaI | Hyphomonas jannaschiana | 5' GATATC 3' CTATAG
|
5' ---GAT ATC--- 3' 3' ---CTA TAG--- 5'
|
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HpaI | Haemophilus parainfluenzae | 5' GTTAAC 3' CAATTG
|
5' ---GTT AAC--- 3' 3' ---CAA TTG--- 5'
|
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HpaII | Haemophilus parainfluenzae | 5' CCGG 3' GGCC
|
5' ---C CGG--- 3' 3' ---GGC C--- 5'
|
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HphI | Haemophilus parahaemolyticus | 5' GGTGA 3' CCACT
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5' ---GGTGAN6NN --- 3' 3' ---CCACTN6N N--- 5'
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AsuHPI, SspD5I | |||||||
Hpy8I | Helicobacter pylori A 8-5 | 5' GTNNAC 3' CANNTG
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5' ---GTN NAC--- 3' 3' ---CAN NTG--- 5'
|
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Hpy51I | Helicobacter pylori 51 | 5' GTSAC 3' CASTG
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5' --- GTSAC--- 3' 3' ---CASTG --- 5'
|
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Hpy99I | 3GOX | Helicobacter pylori J99 | 5' CGWCG 3' GCWGC
|
5' ---CGWCG --- 3' 3' --- GCWGC--- 5'
|
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Hpy178III | Helicobacter pylori J178 | 5' TCNNGA 3' AGNNCT
|
5' ---TC NNGA--- 3' 3' ---AGNN CT--- 5'
|
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Hpy188I | Helicobacter pylori J188 | 5' TCNGA 3' AGNCT
|
5' ---TCN GA--- 3' 3' ---AG NCT--- 5'
|
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Hpy188III | Helicobacter pylori J188 | 5' TCNNGA 3' AGNNCT
|
5' ---TC NNGA--- 3' 3' ---AGNN CT--- 5'
|
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HpyAV | Helicobacter pylori 26695 | 5' CCTTC 3' GGAAG
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5' ---CCTTCN4NN --- 3' 3' ---GGAAGN4N N--- 5'
|
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HpyBI | Helicobacter pylori Roberts | 5' GTAC 3' CATG
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5' ---GT AC--- 3' 3' ---CA TG--- 5'
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AfaI, Csp6I, CviQI, CviRII, PabI, PlaAII, RsaI, RsaNI | |||||||
HpyBII | Helicobacter pylori Roberts | 5' GTNNAC 3' CANNTG
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5' ---GTN NAC--- 3' 3' ---CAN NTG--- 5'
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HpyCI | Helicobacter pylori | 5' GATATC 3' CTATAG
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5' ---GAT ATC--- 3' 3' ---CTA TAG--- 5'
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HpyC1I | Helicobacter pylori | 5' CCATC 3' GGTAG
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5' ---CCATCNNNN N--- 3' 3' ---GGTAGNNNNN --- 5'
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HpyCH4I | Helicobacter pylori CH4 | 5' CATG 3' GTAC
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5' ---CATG --- 3' 3' --- GTAC--- 5'
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HpyCH4III | Helicobacter pylori CH4 | 5' ACNGT 3' TGNCA
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5' ---ACN GT--- 3' 3' ---TG NCA--- 5'
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HpyCH4IV | Helicobacter pylori CH4 | 5' ACGT 3' TGCA
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5' ---A CGT--- 3' 3' ---TGC A--- 5'
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HpyCH4V | Helicobacter pylori CH4 | 5' TGCA 3' ACGT
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5' ---TG CA--- 3' 3' ---AC GT--- 5'
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HpyF10VI | Helicobacter pylori RFL10 | 5' GCN7GC 3' CGN7CG
|
5' ---GCNNNNN NNGC--- 3' 3' ---CGNN NNNNNCG--- 5'
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HpyF44III | Helicobacter pylori RFL44 | 5' TGCA 3' ACGT
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5' ---TG CA--- 3' 3' ---AC GT--- 5'
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HsoI | Haemophilus somnus 2336 | 5' GCGC 3' CGCG
|
5' ---G CGC--- 3' 3' ---CGC G--- 5'
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AspLEI, BstHHI, CfoI, FnuDIII, Hin6I, HinP1I, HspAI, SciNI | |||||||
Hsp92I | Haemophilus sp. 92 | 5' GRCGYC 3' CYGCRG
|
5' ---GR CGYC--- 3' 3' ---CYGC RG--- 5'
|
AcyI, AhaII, AosII, AstWI, HgiI, HgiDI, HgiHII, Hin1I, Hsp92I | |||||||
Hsp92II | Haemophilus sp. 92 | 5' CATG 3' GTAC
|
5' ---CATG --- 3' 3' --- GTAC--- 5'
|
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HspAI | Haemophilus sp. A | 5' GCGC 3' CGCG
|
5' ---G CGC--- 3' 3' ---CGC G--- 5'
|
AspLEI, BspLAI, BstHHI, FnuDIII, HhaI, Hin6I, HinP1I, HsoI, SciNI | |||||||
HsuI | Haemophilus suis | 5' AAGCTT 3' TTCGAA
|
5' ---A AGCTT--- 3' 3' ---TTCGA A--- 5'
|
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Enzyme | PDB code | Source | Recognition sequence | Cut | Isoschizomers |
ItaI | Ilyobcater tartaricus | 5' GCNGC 3' CGNCG
|
5' ---GC NGC--- 3' 3' ---CGN CG--- 5'
|
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Enzyme | PDB code | Source | Recognition sequence | Cut | Isoschizomers | |||
KasI | Kluyvera ascorbata | 5' GGCGCC 3' CCGCGG
|
5' ---G GCGCC--- 3' 3' ---CCGCG G--- 5'
|
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Kaz48kI | Klebsiella azeanae | 5' RGGNCCY 3' YCCNGGR
|
5' ---RGGNC CY--- 3' 3' ---YC CNGGR--- 5'
|
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KoxII | Klebsiella oxytoca | 5' GRGCYC 3' CYCGRG
|
5' ---GRGCY C--- 3' 3' ---C YCGRG--- 5'
|
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KpnI [8] | Klebsiella pneumoniae OK8 | 5' GGTACC 3' CCATGG
|
5' ---GGTAC C--- 3' 3' ---C CATGG--- 5'
|
Acc65I, AhaB8I, Asp718I, SthI | ||||
Kpn2I | Klebsiella pneumoniae RFL2 | 5' TCCGGA 3' AGGCCT
|
5' ---T CCGGA--- 3' 3' ---AGGCC T--- 5'
|
Aor13HI, BbvAIII, BseAI, BsiMI, BspEI, BspMII, CauB3I, MroI | ||||
Kpn378I | Klebsiella pneumoniae 378 | 5' CCGCGG 3' GGCGCC
|
5' ---CCGC GG--- 3' 3' ---GG CGCC--- 5'
|
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Kpn2kI | Klebsiella pneumoniae 2k | 5' CCNGG 3' GGNCC
|
5' --- CCNGG--- 3' 3' ---GGNCC --- 5'
|
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Kpn49kI | Klebsiella pneumoniae 49k | 5' GAATTC 3' CTTAAG
|
5' ---G AATTC--- 3' 3' ---CTTAA G--- 5'
|
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Kpn49kII | Klebsiella pneumoniae 49k | 5' CCSGG 3' GGSCC
|
5' --- CCSGG--- 3' 3' ---GGSCC --- 5'
|
AhaI, AsuC2I, BcnI, CauII, EcoHI, HgiS22I, Mgl14481I, NciI | ||||
KspI | Kluyvera sp. | 5' CCGCGG 3' GGCGCC
|
5' ---CCGC GG--- 3' 3' ---GG CGCC--- 5'
|
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Ksp22I | Kurthia sp. 22 | 5' TGATCA 3' ACTAGT
|
5' ---T GATCA--- 3' 3' ---ACTAG T--- 5'
|
| ||||
Ksp632I | Kluyvera sp. 632 | 5' CTCTTC 3' GAGAAG
|
5' ---CTCTTCN NNN--- 3' 3' ---GAGAAGNNNN --- 5'
|
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KspAI | Kurthia sp. N88 | 5' GTTAAC 3' CAATTG
|
5' ---GTT AAC--- 3' 3' ---CAA TTG--- 5'
|
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Kzo9I | Kurthia zopfii 9 | 5' GATC 3' CTAG
|
5' --- GATC--- 3' 3' ---CTAG --- 5'
|
Bce243I, Bsp105I, BspFI, BstMBI, CpfI, LlaAI, NdeII, Sth368I | ||||
Kzo49I | Kurthia zopfii 49 | 5' GGWCC 3' CCWGG
|
5' ---G GWCC--- 3' 3' ---CCWG G--- 5'
|
Bme216I, CauI, DsaIV, FdiI, HgiBI, HgiHIII, Psp03I, VpaK11AI |
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Legend of nucleobases | |
---|---|
Code | Nucleotide represented |
A | Adenine (A) |
C | Cytosine (C) |
G | Guanine (G) |
T | Thymine (T) |
N | A, C, G or T |
M | A or C |
R | A or G |
W | A or T |
Y | C or T |
S | C or G |
K | G or T |
H | A, C or T |
B | C, G or T |
V | A, C or G |
D | A, G or T |
This article contains a list of the most studied restriction enzymes whose names start with G to K inclusive. It contains approximately 90 enzymes.
The following information is given:
as in this not listed enzyme: | EcoR70I |
Enzyme | PDB code | Source | Recognition sequence | Cut | Isoschizomers |
GalI | Gluconobacter albidus | 5' CCGCGG 3' GGCGCC
|
5' ---CCGC GG--- 3' 3' ---GG CGCC--- 5'
|
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GceI | Gluconobacter cerinus | 5' CCGCGG 3' GGCGCC
|
5' ---CCGC GG--- 3' 3' ---GG CGCC--- 5'
|
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GceGLI | Gluconobacter cerinus | 5' CCGCGG 3' GGCGCC
|
5' ---CCGC GG--- 3' 3' ---GG CGCC--- 5'
|
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GdiI | Gluconobacter dioxyacetonicus | 5' AGGCCT 3' TCCGGA
|
5' ---AGG CCT--- 3' 3' ---TCC GGA--- 5'
|
AatI, AspMI, Eco147I, PceI, SarI, Sru30DI, SseBI, SteI, StuI | |
GdiII | Gluconobacter dioxyacetonicus | 5' CGGCCR 3' GCCGGY
|
5' ---C GGCCR--- 3' 3' ---GCCGG Y--- 5'
|
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GstI | Geobacillus stearothermophilus | 5' GGATCC 3' CCTAGG
|
5' ---G GATCC--- 3' 3' ---CCTAG G--- 5'
|
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GsuI | Gluconobacter suboxydans H-15T | 5' CTGGAG 3' GACCTC
|
5' ---CTGGAGN12NNNN --- 3' 3' ---GACCTCN12NN NN--- 5'
|
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Enzyme | PDB code | Source | Recognition sequence | Cut | Isoschizomers | ||||||
HacI | Halococcus acetoinfaciens | 5' GATC 3' CTAG
|
5' --- GATC--- 3' 3' ---CTAG --- 5'
|
Bme12I, Bsp67I, BstENII, CcyI, FnuEI, MgoI, NphI, Sau3AI | |||||||
HaeI | Haemophilus aegyptius | 5' WGGCCW 3' WCCGGW
|
5' ---WGG CCW--- 3' 3' ---WCC GGW--- 5'
|
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HaeII | Haemophilus aegypticus | 5' RGCGCY 3' YCGCGR
|
5' ---RGCGC Y--- 3' 3' ---Y CGCGR--- 5'
|
| |||||||
HaeIII | Haemophilus aegypticus | 5' GGCC 3' CCGG
|
5' ---GG CC--- 3' 3' ---CC GG--- 5'
|
BsuRI | |||||||
HaeIV | Haemophilus aegyptius | 5' GAYN5RTC 3' CTRN5YAG
|
5' ---GAYN5RTCN8NNNNNN --- 3' 3' ---CTRN5YAGN8N NNNNN--- 5'
|
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HalI | Hafnia alvei B6 | 5' GAATTC 3' CTTAAG
|
5' ---G AATTC--- 3' 3' ---CTTAA G--- 5'
|
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HalII | Hafnia alvei B6 | 5' CTGCAG 3' GACGTC
|
5' ---CTGCA G--- 3' 3' ---G ACGTC--- 5'
|
AjoI, AliAJI, Bsp63I, CfrA4I, CfuII, CstI, PstI, SflI, Srl5DI, Sst12I | |||||||
HapII | Haemophilus aphrophilus | 5' CCGG 3' GGCC
|
5' ---C CGG--- 3' 3' ---GGC C--- 5'
|
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HgaI [7] | Haemophilus gallinarum | 5' GACGC 3' CTGCG
|
5' ---GACGCN4N NNNNN--- 3' 3' ---CTGCGN4NNNNNN --- 5'
|
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HgiI | Herpetosiphon giganteus 3303 | 5' GRCGYC 3' CYGCRG
|
5' ---GR CGYC--- 3' 3' ---CYGC RG--- 5'
|
AcyI, AsuIII, BbiII, BstACI, HgiGI, HgiHII, Hin1I, PamII | |||||||
HgiAI | Herpetosiphon giganteus HP1023 | 5' GWGCWC 3' CWCGWG
|
5' ---GWGCW C--- 3' 3' ---C WCGWG--- 5'
|
| |||||||
HgiBI | Herpetosiphon giganteus Hpg5 | 5' GGWCC 3' CCWGG
|
5' ---G GWCC--- 3' 3' ---CCWG G--- 5'
|
Bme18I, BthAI, DsaIV, ErpI, FspMSI, HgiEI, Psp03I, VpaK11AI | |||||||
HgiCI | Herpetosiphon giganteus Hpg9 | 5' GGYRCC 3' CCRYGG
|
5' ---G GYRCC--- 3' 3' ---CCRYG G--- 5'
|
AccB1I, BanI, BspT107I, BshNI, Eco64I, HgiHI, MspB4I, PfaAI | |||||||
HgiCII | Herpetosiphon giganteus Hpg9 | 5' GGWCC 3' CCWGG
|
5' ---G GWCC--- 3' 3' ---CCWG G--- 5'
|
Bme18I, BthAI, DsaIV, FspMSI, HgiHIII, Psp03I, VpaK11AI | |||||||
HgiCIII | Herpetosiphon giganteus Hpg9 | 5' GTCGAC 3' CAGCTG
|
5' ---G TCGAC--- 3' 3' ---CAGCT G--- 5'
|
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HgiDI | Herpetosiphon giganteus Hpa2 | 5' GRCGYC 3' CYGCRG
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5' ---GR CGYC--- 3' 3' ---CYGC RG--- 5'
|
AcyI, AsuIII, BbiII, BstACI, HgiGI, HgiI, Hin1I, PamII | |||||||
HgiDII | Herpetosiphon giganteus Hpa2 | 5' GTCGAC 3' CAGCTG
|
5' ---G TCGAC--- 3' 3' ---CAGCT G--- 5'
|
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HgiEI | Herpetosiphon giganteus Hpg24 | 5' GGWCC 3' CCWGG
|
5' ---G GWCC--- 3' 3' ---CCWG G--- 5'
|
Bme216I, BthAI, DsaIV, ErpI, FspMSI, HgiHIII, VpaK11AI | |||||||
HgiGI | Herpetosiphon giganteus Hpa1 | 5' GRCGYC 3' CYGCRG
|
5' ---GR CGYC--- 3' 3' ---CYGC RG--- 5'
|
AcyI, AosII, BbiII, BstACI, HgiI, HgiGI, Msp17I, PamII | |||||||
HgiHI | Herpetosiphon giganteus HP1049 | 5' GGYRCC 3' CCRYGG
|
5' ---G GYRCC--- 3' 3' ---CCRYG G--- 5'
|
AccB1I, BanI, BspT107I, BshNI, Eco64I, HgiCI, MspB4I, PfaAI | |||||||
HgiHII | Herpetosiphon giganteus HP1049 | 5' GRCGYC 3' CYGCRG
|
5' ---GR CGYC--- 3' 3' ---CYGC RG--- 5'
|
AosII, AsuIII, BsaHI, BstACI, HgiGI, HgiHII, Msp17I, PamII | |||||||
HgiHIII | Herpetosiphon giganteus HP1049 | 5' GGWCC 3' CCWGG
|
5' ---G GWCC--- 3' 3' ---CCWG G--- 5'
|
Bme216I, DsaIV, ErpI, HgiBI, Psp03I, VpaK11AI, VpaK11BI | |||||||
HgiJI | Herpetosiphon giganteus HFS101 | 5' GGWCC 3' CCWGG
|
5' ---G GWCC--- 3' 3' ---CCWG G--- 5'
|
Bme216I, CauI, DsaIV, FdiI, HgiBI, HgiHIII, Psp03I, VpaK11AI | |||||||
HgiJII | Herpetosiphon giganteus HFS101 | 5' GRGCYC 3' CYCGRG
|
5' ---GRGCY C--- 3' 3' ---C YCGRG--- 5'
|
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HgiS22I | Herpetosiphon giganteus | 5' CCSGG 3' GGSCC
|
5' ---CC SGG--- 3' 3' ---GGS CC--- 5'
|
AhaI, AseII, AsuC2I, BcnI, CauII, Eco1831I, EcoHI, Kpn49kII | |||||||
HhaI | Haemophilus haemolyticus | 5' GCGC 3' CGCG
|
5' ---GCG C--- 3' 3' ---C GCG--- 5'
|
AspLEI, BspLAI, BstHHI, CfoI, FnuDIII, Hin6I, HinP1I, SciNI | |||||||
HhaII | Haemophilus haemolyticus | 5' GANTC 3' CTNAG
|
5' ---G ANTC--- 3' 3' ---CTNA G--- 5'
|
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Hin1I | Haemophilus influenzae RFL1 | 5' GRCGYC 3' CYGCRG
|
5' ---GR CGYC--- 3' 3' ---CYGC RG--- 5'
|
AcyI, AhaII, AosII, AstWI, AsuIII, HgiI, HgiDI, HgiDI, Hsp92I | |||||||
Hin1II | Haemophilus influenzae RFL1 | 5' CATG 3' GTAC
|
5' ---CATG --- 3' 3' --- GTAC--- 5'
|
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Hin2I | Haemophilus influenzae RFL2 | 5' CCGG 3' GGCC
|
5' ---C CGG--- 3' 3' ---GGC C--- 5'
|
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Hin4I | Haemophilus influenzae RFL4 | 5' GAYN5VTC 3' CTRN5BAG
|
5' ---GAYN5VTCN7NNNNNN --- 3' 3' ---CTRN5BAGN7N NNNNN--- 5'
|
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Hin6I | Haemophilus influenzae RFL6 | 5' GCGC 3' CGCG
|
5' ---G CGC--- 3' 3' ---CGC G--- 5'
|
AspLEI, BspLAI, BstHHI, CfoI, FnuDIII, HhaI, HsoI, HspAI, SciNI | |||||||
HinJCI | Haemophilus influenzae JC9 | 5' GTYRAC 3' CARYTG
|
5' ---GTY RAC--- 3' 3' ---CAR YTG--- 5'
|
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HinP1I | 2FL3 Search PDBe | Haemophilus influenzae P1 | 5' GCGC 3' CGCG
|
5' ---G CGC--- 3' 3' ---CGC G--- 5'
|
BspLAI, BstHHI, CfoI, FnuDIII, HhaI, Hin6I, HsoI, HspAI, SciNI | ||||||
HincII | 2AUD Search PDBe | Haemophilus influenzae Rc | 5' GTYRAC 3' CARYTG
|
5' ---GTY RAC--- 3' 3' ---CAR YTG--- 5'
|
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HindII | Haemophilus influenzae Rd | 5' GTYRAC 3' CARYTG
|
5' ---GTY RAC--- 3' 3' ---CAR YTG--- 5'
|
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HindIII | 2E52, Search PDBe | Haemophilus influenzae Rd | 5' AAGCTT 3' TTCGAA
|
5' ---A AGCTT--- 3' 3' ---TTCGA A--- 5'
|
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HinfI | Haemophilus influenzae Rf | 5' GANTC 3' CTNAG
|
5' ---G ANTC--- 3' 3' ---CTNA G--- 5'
|
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HjaI | Hyphomonas jannaschiana | 5' GATATC 3' CTATAG
|
5' ---GAT ATC--- 3' 3' ---CTA TAG--- 5'
|
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HpaI | Haemophilus parainfluenzae | 5' GTTAAC 3' CAATTG
|
5' ---GTT AAC--- 3' 3' ---CAA TTG--- 5'
|
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HpaII | Haemophilus parainfluenzae | 5' CCGG 3' GGCC
|
5' ---C CGG--- 3' 3' ---GGC C--- 5'
|
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HphI | Haemophilus parahaemolyticus | 5' GGTGA 3' CCACT
|
5' ---GGTGAN6NN --- 3' 3' ---CCACTN6N N--- 5'
|
AsuHPI, SspD5I | |||||||
Hpy8I | Helicobacter pylori A 8-5 | 5' GTNNAC 3' CANNTG
|
5' ---GTN NAC--- 3' 3' ---CAN NTG--- 5'
|
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Hpy51I | Helicobacter pylori 51 | 5' GTSAC 3' CASTG
|
5' --- GTSAC--- 3' 3' ---CASTG --- 5'
|
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Hpy99I | 3GOX | Helicobacter pylori J99 | 5' CGWCG 3' GCWGC
|
5' ---CGWCG --- 3' 3' --- GCWGC--- 5'
|
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Hpy178III | Helicobacter pylori J178 | 5' TCNNGA 3' AGNNCT
|
5' ---TC NNGA--- 3' 3' ---AGNN CT--- 5'
|
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Hpy188I | Helicobacter pylori J188 | 5' TCNGA 3' AGNCT
|
5' ---TCN GA--- 3' 3' ---AG NCT--- 5'
|
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Hpy188III | Helicobacter pylori J188 | 5' TCNNGA 3' AGNNCT
|
5' ---TC NNGA--- 3' 3' ---AGNN CT--- 5'
|
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HpyAV | Helicobacter pylori 26695 | 5' CCTTC 3' GGAAG
|
5' ---CCTTCN4NN --- 3' 3' ---GGAAGN4N N--- 5'
|
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HpyBI | Helicobacter pylori Roberts | 5' GTAC 3' CATG
|
5' ---GT AC--- 3' 3' ---CA TG--- 5'
|
AfaI, Csp6I, CviQI, CviRII, PabI, PlaAII, RsaI, RsaNI | |||||||
HpyBII | Helicobacter pylori Roberts | 5' GTNNAC 3' CANNTG
|
5' ---GTN NAC--- 3' 3' ---CAN NTG--- 5'
|
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HpyCI | Helicobacter pylori | 5' GATATC 3' CTATAG
|
5' ---GAT ATC--- 3' 3' ---CTA TAG--- 5'
|
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HpyC1I | Helicobacter pylori | 5' CCATC 3' GGTAG
|
5' ---CCATCNNNN N--- 3' 3' ---GGTAGNNNNN --- 5'
|
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HpyCH4I | Helicobacter pylori CH4 | 5' CATG 3' GTAC
|
5' ---CATG --- 3' 3' --- GTAC--- 5'
|
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HpyCH4III | Helicobacter pylori CH4 | 5' ACNGT 3' TGNCA
|
5' ---ACN GT--- 3' 3' ---TG NCA--- 5'
|
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HpyCH4IV | Helicobacter pylori CH4 | 5' ACGT 3' TGCA
|
5' ---A CGT--- 3' 3' ---TGC A--- 5'
|
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HpyCH4V | Helicobacter pylori CH4 | 5' TGCA 3' ACGT
|
5' ---TG CA--- 3' 3' ---AC GT--- 5'
|
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HpyF10VI | Helicobacter pylori RFL10 | 5' GCN7GC 3' CGN7CG
|
5' ---GCNNNNN NNGC--- 3' 3' ---CGNN NNNNNCG--- 5'
|
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HpyF44III | Helicobacter pylori RFL44 | 5' TGCA 3' ACGT
|
5' ---TG CA--- 3' 3' ---AC GT--- 5'
|
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HsoI | Haemophilus somnus 2336 | 5' GCGC 3' CGCG
|
5' ---G CGC--- 3' 3' ---CGC G--- 5'
|
AspLEI, BstHHI, CfoI, FnuDIII, Hin6I, HinP1I, HspAI, SciNI | |||||||
Hsp92I | Haemophilus sp. 92 | 5' GRCGYC 3' CYGCRG
|
5' ---GR CGYC--- 3' 3' ---CYGC RG--- 5'
|
AcyI, AhaII, AosII, AstWI, HgiI, HgiDI, HgiHII, Hin1I, Hsp92I | |||||||
Hsp92II | Haemophilus sp. 92 | 5' CATG 3' GTAC
|
5' ---CATG --- 3' 3' --- GTAC--- 5'
|
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HspAI | Haemophilus sp. A | 5' GCGC 3' CGCG
|
5' ---G CGC--- 3' 3' ---CGC G--- 5'
|
AspLEI, BspLAI, BstHHI, FnuDIII, HhaI, Hin6I, HinP1I, HsoI, SciNI | |||||||
HsuI | Haemophilus suis | 5' AAGCTT 3' TTCGAA
|
5' ---A AGCTT--- 3' 3' ---TTCGA A--- 5'
|
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Enzyme | PDB code | Source | Recognition sequence | Cut | Isoschizomers |
ItaI | Ilyobcater tartaricus | 5' GCNGC 3' CGNCG
|
5' ---GC NGC--- 3' 3' ---CGN CG--- 5'
|
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Enzyme | PDB code | Source | Recognition sequence | Cut | Isoschizomers | |||
KasI | Kluyvera ascorbata | 5' GGCGCC 3' CCGCGG
|
5' ---G GCGCC--- 3' 3' ---CCGCG G--- 5'
|
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Kaz48kI | Klebsiella azeanae | 5' RGGNCCY 3' YCCNGGR
|
5' ---RGGNC CY--- 3' 3' ---YC CNGGR--- 5'
|
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KoxII | Klebsiella oxytoca | 5' GRGCYC 3' CYCGRG
|
5' ---GRGCY C--- 3' 3' ---C YCGRG--- 5'
|
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KpnI [8] | Klebsiella pneumoniae OK8 | 5' GGTACC 3' CCATGG
|
5' ---GGTAC C--- 3' 3' ---C CATGG--- 5'
|
Acc65I, AhaB8I, Asp718I, SthI | ||||
Kpn2I | Klebsiella pneumoniae RFL2 | 5' TCCGGA 3' AGGCCT
|
5' ---T CCGGA--- 3' 3' ---AGGCC T--- 5'
|
Aor13HI, BbvAIII, BseAI, BsiMI, BspEI, BspMII, CauB3I, MroI | ||||
Kpn378I | Klebsiella pneumoniae 378 | 5' CCGCGG 3' GGCGCC
|
5' ---CCGC GG--- 3' 3' ---GG CGCC--- 5'
|
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Kpn2kI | Klebsiella pneumoniae 2k | 5' CCNGG 3' GGNCC
|
5' --- CCNGG--- 3' 3' ---GGNCC --- 5'
|
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Kpn49kI | Klebsiella pneumoniae 49k | 5' GAATTC 3' CTTAAG
|
5' ---G AATTC--- 3' 3' ---CTTAA G--- 5'
|
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Kpn49kII | Klebsiella pneumoniae 49k | 5' CCSGG 3' GGSCC
|
5' --- CCSGG--- 3' 3' ---GGSCC --- 5'
|
AhaI, AsuC2I, BcnI, CauII, EcoHI, HgiS22I, Mgl14481I, NciI | ||||
KspI | Kluyvera sp. | 5' CCGCGG 3' GGCGCC
|
5' ---CCGC GG--- 3' 3' ---GG CGCC--- 5'
|
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Ksp22I | Kurthia sp. 22 | 5' TGATCA 3' ACTAGT
|
5' ---T GATCA--- 3' 3' ---ACTAG T--- 5'
|
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Ksp632I | Kluyvera sp. 632 | 5' CTCTTC 3' GAGAAG
|
5' ---CTCTTCN NNN--- 3' 3' ---GAGAAGNNNN --- 5'
|
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KspAI | Kurthia sp. N88 | 5' GTTAAC 3' CAATTG
|
5' ---GTT AAC--- 3' 3' ---CAA TTG--- 5'
|
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Kzo9I | Kurthia zopfii 9 | 5' GATC 3' CTAG
|
5' --- GATC--- 3' 3' ---CTAG --- 5'
|
Bce243I, Bsp105I, BspFI, BstMBI, CpfI, LlaAI, NdeII, Sth368I | ||||
Kzo49I | Kurthia zopfii 49 | 5' GGWCC 3' CCWGG
|
5' ---G GWCC--- 3' 3' ---CCWG G--- 5'
|
Bme216I, CauI, DsaIV, FdiI, HgiBI, HgiHIII, Psp03I, VpaK11AI |
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