An alpha/beta barrel is a protein fold formed by units composed of a short α-helix followed by two anti-parallel β-strands, followed by an α-helix and a β-strand; the three β-strands form a β-sheet that runs parallel to the barrel and the α-helix is in the outside of the barrel but does not contact the α-helices of the other repeats like in TIM barrels.
The protein structures known for this fold come proteins from the eukaryotic and archaeal initiation factor 6 family, namely the
Methanococcus jannaschii aIF6 and
Saccharomyces cerevisiae eIF6,
[1] and from the eIF6 from
Dictyostelium discoideum.
[2]
These alpha/beta barrels are commonly occurring motifs constructed from repetitions of the beta-alpha-beta loop motif. This alpha/beta barrel is a domain of pyruvate kinase enzyme. [3]
An alpha/beta barrel is a protein fold formed by units composed of a short α-helix followed by two anti-parallel β-strands, followed by an α-helix and a β-strand; the three β-strands form a β-sheet that runs parallel to the barrel and the α-helix is in the outside of the barrel but does not contact the α-helices of the other repeats like in TIM barrels.
The protein structures known for this fold come proteins from the eukaryotic and archaeal initiation factor 6 family, namely the
Methanococcus jannaschii aIF6 and
Saccharomyces cerevisiae eIF6,
[1] and from the eIF6 from
Dictyostelium discoideum.
[2]
These alpha/beta barrels are commonly occurring motifs constructed from repetitions of the beta-alpha-beta loop motif. This alpha/beta barrel is a domain of pyruvate kinase enzyme. [3]